Diverse World of Proteobacteria
3
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GRAM NEGATIVE BACTERIA
Wide morphological and metabolic diversity.
Clinical, environmental, and industrial relevance
Phylum with highest number of cultured representatives
5 groups
(based on 16S rRNA):
,
,
,
and
2
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3
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b
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1
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-
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b
a
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:
R
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o
b
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m
N
2
fixing organisms:
Some cyanobacteria (
Bacteria
)
Some anoxygenic phototrophs (
Bacteria
)
Some chemolithotrophs (
Bacteria/Archaea
)
Some chemoorganotrophs (
Bacteria/Archaea
)
Some chemoorganotrophs (
Bacteria
)
FREE
LIVING
SYMBIONTS
E.g. symbionts
of leguminous
plants
3
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RECOGNITION
NOD FACTORS
3
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3
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:
R
h
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o
b
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m
3
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3
.
1
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b
a
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.
A
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r
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b
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pTi
3
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b
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3
.
1
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:
“
a
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i
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a
c
i
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b
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”
They oxidize sugars and alcohols
Acidophilic
Acetobacter
Gluconobacter
H
2
0
O
2
E
T
H
A
N
O
L
E
T
H
A
N
A
L
A
C
E
T
I
C
A
C
I
D
3
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3
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1
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:
C
a
u
l
o
b
a
c
t
e
r
Prosthecae: cytoplasmic extrusions (stalks, hyphae, or appendages)
Budding division (mother cells retain their original identity)
Attachment, increased surface-to-volume ratio, reduced cell sinking
Aquatic bacteria (either planctonic or benthonic)
PROSTHECAE
3
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3
.
2
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b
a
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a
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N
e
i
s
s
e
r
i
a
Aerobic diplococcus
Penicillin sensitive
Pathogens and normal microbiota
Carrier state
N. meningitidis
(“meningococcus”)
Aerosols
Nasopharynx
Blood stream:
Meningitis
(sudden onset of headheache, vomiting
and stiff neck)
Intravascular coagulation shock
3
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b
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3
.
2
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b
a
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a
:
N
e
i
s
s
e
r
i
a
N. gonorrhoeae
(“gonococcus”)
- Very sensitive to environmental
stress (drying, sunlight, UV light…)
- High incidence (STD, ETS)
- Mild symptoms* in women
(asymptomatic carriers). PID
- Complications if untreated
Sexual contact
Mucous membranes of the
genitourinary tract
Reasons?
3
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3
.
2
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b
a
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A
c
i
d
i
t
h
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o
b
a
c
i
l
l
u
s
Thiobacillus
ferrooxidans
Chemolithotroph:
donor
:
Fe
2+
/
acceptor
: O
2
They use large amounts of substrate (they fix CO
2
)
pH acidic (
acidiphilic
)
Acid mine drainage (formation of H
2
SO
4
and Fe
3+
) (O
2
, water and
bacteria)
Biolixiviation
3
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3
.
2
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b
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s
.
Z
o
o
g
l
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a
WASTEWATER
TREATMENT
BOD:
Biological Oxygen Demand
3
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3
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3
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:
L
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n
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a
Rods
Complex nutritional requirements (Fe)
Resistent to
-lactamic
Terrestrial and aquatic habitats
Waterborne, aerosols (no person-to-person)
Cases per 100.000 inhabitants. Spain
Emerging disease (1976)
L. pneumophila
LEGIONELLOSIS
Pontiac fever
Pneumonia
3
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3
.
3
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:
L
e
g
i
o
n
e
l
l
a
Legionella
inside an alveolar
macrophage
3
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3
.
3
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:
H
a
e
m
o
p
h
i
l
u
s
Haemophilus influenzae
3
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3
.
3
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:
P
s
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u
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o
m
o
n
a
s
More than 100 species
Some species utilize over 100 different compounds
Aerobic chemoorganotrophic rods
•
Some chemolitotroph (H
2
, CO)
•
Some anaerobic (NO
3
-
/ fermentation)
Sugar oxidation:
Entner-Doudoroff pathway
Fluorescent pigments
3
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3
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3
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:
P
s
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u
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o
m
o
n
a
s
Opportunistic pathogen; intrahospitalary infections
Resistence plasmids (
plasmids R
)
Respiratory tract infections
Skin infections
Bacteremia
Endocarditis
Joint infections
Fastrointestinalinfections
UTI
Eye infections
CNS infections
Upper respiratory tract infections
Cystic fibrosis complications
Pseudomonas
aeruginosa
3
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3
.
3
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:
P
s
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o
m
o
n
a
s
DEGRADATIVE
MEGAPLASMIDS
3
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3
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3
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-
P
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a
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r
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a
:
F
a
m
i
l
y
E
n
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o
b
a
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r
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a
c
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a
e
Enteric bacteria
Facultatively aerobic, gram negative rods
•
Fermentation of sugars to organic acids
•
Some respire NO
3
-
to NO
2
-
(never to N
2
)
Virulence factors and pathogenicity
3
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3
.
3
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-
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r
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b
a
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t
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r
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:
F
a
m
i
l
y
E
n
t
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b
a
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r
i
a
c
e
a
e
Escherichia
Warm blooded animals
Gut microbiota (comensals)
Pathogenic strains:
E. coli
enterotoxigenic
(ECET)
E. coli
enteropathogenic
(ECEP)
E. coli
enterohemorrhagic
(ECEH)
(STEC)
E. coli
O157:H7
E. coli
O104:H14
Gastroenteritis
Hemolytic uremic syndrom (HUS)
Urinary tract infections (UTI)
vitamin K
3
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3
.
3
.
-
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r
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o
b
a
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t
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r
i
a
s
.
F
a
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i
a
E
n
t
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r
o
b
a
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r
i
a
c
e
a
e
Salmonella
Habitat: gastrointestinal tract of wild and domestic
animals, birds, pets, and insects.
Zoonosis.
Main pathogenic serovars:
S. typhimurium:
salmonellosis (enterocolitis)
S. typhi:
typhoid fever
3
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3
.
3
.
-
P
r
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o
b
a
c
t
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r
i
a
:
F
a
m
i
l
y
E
n
t
e
r
o
b
a
c
t
e
r
i
a
c
e
a
e
Shigella
Reservoir: infected gut
S. dysenteriae
:
- Shigellosis or
bacillary dysentery
(“disentería bacilar”)
- HUS
Shigella
cells invading intestinal
epithelium
3
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P
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P
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o
b
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i
a
3
.
3
.
-
P
r
o
t
e
o
b
a
c
t
e
r
i
a
:
F
a
m
i
l
y
E
n
t
e
r
o
b
a
c
t
e
r
i
a
c
e
a
e
Buboes
(“bubones”)
Gangrene and black spots (“black death”)
Bacteria in lung tissue
Yersinia: Y. pestis
PLAGUE
(bubonic, pneumonic and speticemic). Zoonotic disease.
3
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b
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3
.
3
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r
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b
a
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i
a
s
:
V
i
b
r
i
o
Curved and straight rods
Aquatic media
Many species, some pathogenic:
V. cholerae:
cholera
CHOLERA TOXIN
3
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3
.
3
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a
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i
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:
P
h
o
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o
b
a
c
t
e
r
i
u
m
FMNH
2
+ O
2
+ RCHO FMN + RCOOH + H
2
O + luz
NADH
NAD
+
FMN
luciferase
Autoinduction: “quorum sensing”
Inducer molecule: acyl homoserine lactone (AHL)
3
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3
.
4
.
-
P
r
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t
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b
a
c
t
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a
:
B
d
e
l
l
o
v
i
b
r
i
o
“Predator” of other bacteria
3
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P
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3
.
4
.
-
P
r
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b
a
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t
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r
i
a
:
S
U
L
F
A
T
E
(
A
N
D
S
U
L
F
U
R
)
R
E
D
U
C
I
N
G
B
A
C
T
E
R
I
A
(
S
R
B
)
*
Desulfo
- (generally) or Desulfuro-
They reduce sulfate/sulfur(
acceptors
)
Final products
: H
2
S
Strict anaerobes
(anoxic environments)
Group I:
Acetate cannot be used as donor
Sulfate reducing bacteria
Group II:
H
2
and acetate can be used as donors
Sulfate reducing bacteria
Fixation of CO
2
(acetil-CoA pathway)
Group III:
H
2
or organic matter as donors
S and sulfite reducing bacteria (NEVER sulfate)
Donors
H
2
O. M.
*Some sulfate-reducing bacteria are not delta-proteobacteria
3
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b
a
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t
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i
a
3
.
4
.
-
P
r
o
t
e
o
b
a
c
t
e
r
i
a
:
S
U
L
F
U
R
A
N
D
S
U
L
F
A
T
E
R
E
D
U
C
I
N
G
B
A
C
T
E
R
I
A
m.o.
NO
3
-
Mn
+4
Fe
+3
SO
4
-2
CO
2
E’ (V)
+0.8
-0.2
0
Stratification of electronic acceptors
Limited organic matter
Most important metabolism: sulfate reduction
Competence (or not---) with methanogenic
Archaea
Marine sediments
Consortia of SRB/methane oxidizing
Archaea
O
2
3
.
P
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o
b
a
c
t
e
r
i
a
3
.
4
.
-
P
r
o
t
e
o
b
a
c
t
e
r
i
a
:
M
Y
X
O
B
A
C
T
E
R
I
A
Vegetative cells
: long rods without flagella (names: Myxo…). Gliding.
Fruiting bodies:
cell-to-cell communication and differentiation
3
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P
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P
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e
o
b
a
c
t
e
r
i
a
3
.
5
.
-
P
r
o
t
e
o
b
a
c
t
e
r
i
a
:
C
a
m
p
y
l
o
b
a
c
t
e
r
a
n
d
H
e
l
i
c
o
b
a
c
t
e
r
(
b
o
t
h
m
i
c
r
o
a
e
r
o
p
h
i
l
i
c
)
Campylobacter:
acute gastroenteritis, food borne disease (chicken meat…)
Helicobacter
:
gastritis and ulcers
http://www.nobelprize.org/nobel_prizes/medicine/laureates/2005/marshall-lecture.pdf
3
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P
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P
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b
a
c
t
e
r
i
a
3
.
6
.
O
T
H
E
R
P
R
O
T
E
O
B
A
C
T
E
R
I
A
:
N
I
T
R
I
F
Y
I
N
G
B
A
C
T
E
R
I
A
,
, and
Proteobacteria
Electron donors
:
NH
4
+
and
NO
2
-
/
Acceptor
: O
2
(
Nitroso…/ Nitro…
)
They consume large amounts of substrate: chemolithoautotrops/
chemolithoheterotrophs
Soils and waters; ammonia-rich sites; leaching of NO
3
-
NH
4
+
NO
2
-
NO
3
-
Nitrosomonas
Nitrobacter
AMO
: ammonia monooxygenase
NOR
: nitrite oxidoreductase
Nitrification
Nitrospira
(independent phylum)
Nitrifying
Archaea
3
.
P
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o
b
a
c
t
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r
i
a
3
.
6
.
O
T
H
E
R
P
R
O
T
E
O
B
A
C
T
E
R
I
A
:
S
U
L
F
U
R
O
X
I
D
I
Z
I
N
G
B
A
C
T
E
R
I
A
,
Proteobacteria
Donors
:
H
2
S, S
0
, S
2
O
3
2-
, metallic suflides, H
2
/
Acceptor
: O
2
(sometimes NO
3
-
)
S
0
accumulation inside or outside the cell
Acidithiobacillus
: acidiphilic (A
. ferrooxidans
FeS
2
, Fe
2+
); autotrophs
Thiomargarita
: anaerobic oxidation (acceptor: NO
3
-
)
H
y
d
r
o
t
h
e
r
m
a
l
v
e
n
t
s
:
H
2
S
,
H
2
,
C
O
2
,
O
2
,
N
2
.
.
.
3
.
P
h
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l
u
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P
r
o
t
e
o
b
a
c
t
e
r
i
a
3
.
6
.
O
T
H
E
R
P
R
O
T
E
O
B
A
C
T
E
R
I
A
:
P
U
R
P
L
E
B
A
C
T
E
R
I
A
Anoxygenic phototrophs
Reaction centre: bacteriochlorophylls
Antenna pigments: BChl + carotenoids
Photosynthetic systems: invaginations of
the cytoplasmatic membrane
BChl
EXCITED
BChl
BASAL
E
o
(-)
E
o
(+)
LIGHT
NO external electron donors for ATP
ATP: Cyclic
photophosphorilation
H
+
H
+
cte
-
BChl
EXCITED
BChl
BASAL
External electron donors for NAD(P)H
NAD(P)H: Reverse electronic flow
H
+
H
+
cte
-
H
2
S
S
0
Fe
2+
S
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SO
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2-
Fe
3+
NAD(P)
+
NAD(P)H
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Images property of Fernando Santos
-Proteobacteria (“purple sulfur bacteria”): highly sensitive to O
2
; highly tolerant to [H
2
S]
S compounds as electron donors. Photoautotrophs
(Calvin cycle)
Photoheterotrophs
N
2
fixers
-Proteobacteria (“purple nonsulfur bacteria”): more tolerance to O2; very sensitive to
high [H
2
S]
Chenoorganotrophs, Photoheterotrophs,
photoautotrophs
N2 fixers
Anoxic areas
blooms
Sulfide-rich waters
(SRB)
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Meromictic lakes,
microbial mats
Metabolic diversity of nonsulfur
purple bacteria
Microbial mats: stratification of microbial populations driven by
environmental gradients
Images property of Fernando Santos
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H
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Methylotrophs vs. methanotrophs
Biotic and abiotic methane
Methanotrophs vs.
methanogens
Where does the methane come
from?
Type I
Type II
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Methane as energy source
Methane
monooxygenase
Methano Methanol Formalhehyde CO
2
Ribulose
monophosph
ate pathway
Serine
pathway
Type II
Type I
Methane as carbon source
Methane Methanol Formalhehyde biomass
3
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/
Proteobacteria
Obligate intracellular parasites*
Induce phagocytosis, do not survive outside hosts
Highly specific energy metabolism*, synthesize few compounds
Transmitted by arthropod vectors
Damage to blood vessels
Epidemic tifus (
Rickettsia prowazekii
) Vector: human louse
Rocky Mountains spotty fever (
Rickettsia rickettsii
) Vector: tick
*Q Fever (
Coxiella
) Vectors: tick, aerosols, dairy products
One bacteria is enough!! (
Biological weapon
)
Fever, headheach, weakness
Rash
Organ infections
High mortality untreated
*Exception
Proteobacteria, a phylum of Gram-negative bacteria, exhibit wide morphological and metabolic diversity with clinical, environmental, and industrial relevance. This phylum, boasting the highest number of cultured representatives, is divided into various groups based on 16S rRNA sequencing. From N2-fixing organisms like Rhizobium to acetic acid bacteria that oxidize sugars and alcohols, Proteobacteria play vital roles in different ecosystems, including symbiotic relationships with plants. The images provided offer glimpses into the intricate world of Proteobacteria and their unique characteristics.
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3. Phylum Proteobacteria GRAM NEGATIVE BACTERIA Wide morphological and metabolic diversity. Clinical, environmental, and industrial relevance Phylum with highest number of cultured representatives 5 groups (based on 16S rRNA): , , , and L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
2. Phylum Proteobacteria L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.1. -Proteobacteria: Rhizobium N2 fixing organisms: Some cyanobacteria (Bacteria) Some anoxygenic phototrophs (Bacteria) Some chemolithotrophs (Bacteria/Archaea) Some chemoorganotrophs (Bacteria/Archaea) FREE LIVING Some chemoorganotrophs (Bacteria) SYMBIONTS E.g. symbionts of leguminous plants L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.1. -Proteobacteria: Rhizobium RECOGNITION NOD FACTORS L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.1. -Proteobacteria: Rhizobium L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.1. -Proteobacteria. Agrobacterium pTi L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.1. -Proteobacteria: acetic acid bacteria They oxidize sugars and alcohols Acidophilic ETHANOL ETHANAL Gluconobacter ACETIC ACID e-e- Acetobacter H20 O2 L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.1. -Proteobacteria: Caulobacter Prosthecae: cytoplasmic extrusions (stalks, hyphae, or appendages) Budding division (mother cells retain their original identity) Attachment, increased surface-to-volume ratio, reduced cell sinking Aquatic bacteria (either planctonic or benthonic) PROSTHECAE L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.2. -Proteobacteria. Neisseria Aerobic diplococcus Penicillin sensitive Pathogens and normal microbiota Carrier state N. meningitidis( meningococcus ) Aerosols Nasopharynx Blood stream: Meningitis (sudden onset of headheache, vomiting and stiff neck) Intravascular coagulation shock L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.2. -Proteobacteria: Neisseria N. gonorrhoeae( gonococcus ) - Very sensitive to environmental stress (drying, sunlight, UV light ) - High incidence (STD, ETS) - Mild symptoms* in women (asymptomatic carriers). PID - Complications if untreated Sexual contact Mucous membranes of the genitourinary tract Reasons? L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.2. -Proteobacteria. Acidithiobacillus Chemolithotroph: donor: Fe2+ / acceptor: O2 They use large amounts of substrate (they fix CO2) pH acidic (acidiphilic) Thiobacillus ferrooxidans Acid mine drainage (formation of H2SO4 and Fe3+) (O2, water and bacteria) Biolixiviation L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.2. -Proteobacterias. Zooglea WASTEWATER TREATMENT BOD: Biological Oxygen Demand L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.3. -Proteobacteria: Legionella Rods Complex nutritional requirements (Fe) Resistent to -lactamic Terrestrial and aquatic habitats Waterborne, aerosols (no person-to-person) Pontiac fever LEGIONELLOSIS Pneumonia L. pneumophila Emerging disease (1976) Cases per 100.000 inhabitants. Spain L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.3. -Proteobacteria: Legionella Legionella inside an alveolar macrophage L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.3. -Proteobacteria: Haemophilus Haemophilus influenzae L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.3. -Proteobacteria: Pseudomonas More than 100 species Some species utilize over 100 different compounds Aerobic chemoorganotrophic rods Some chemolitotroph (H2, CO) Some anaerobic (NO3- / fermentation) Sugar oxidation: Entner-Doudoroff pathway Fluorescent pigments L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.3. -Proteobacteria: Pseudomonas Pseudomonas aeruginosa Opportunistic pathogen; intrahospitalary infections Resistence plasmids (plasmids R) Respiratory tract infections Skin infections Bacteremia Endocarditis Joint infections Fastrointestinalinfections UTI Eye infections CNS infections Upper respiratory tract infections Cystic fibrosis complications L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.3. -Proteobacteria: Pseudomonas DEGRADATIVE MEGAPLASMIDS L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.3. -Proteobacteria: Family Enterobacteriaceae Enteric bacteria Facultatively aerobic, gram negative rods Fermentation of sugars to organic acids Some respire NO3- to NO2- (never to N2) Virulence factors and pathogenicity L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.3. -Proteobacteria: Family Enterobacteriaceae Escherichia Warm blooded animals Gut microbiota (comensals) Pathogenic strains: E. colienterotoxigenic (ECET) E. colienteropathogenic (ECEP) E. colienterohemorrhagic (ECEH) (STEC) E. coli O157:H7 E. coli O104:H14 Gastroenteritis Hemolytic uremic syndrom (HUS) Urinary tract infections (UTI) L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
vitamin K L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.3. -Proteobacterias. Familia Enterobacteriaceae Salmonella Habitat: gastrointestinal tract of wild and domestic animals, birds, pets, and insects. Zoonosis. Main pathogenic serovars: S. typhimurium: salmonellosis (enterocolitis) S. typhi: typhoid fever L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.3. -Proteobacteria: Family Enterobacteriaceae Shigella Reservoir: infected gut S. dysenteriae: - Shigellosis or bacillary dysentery( disenter a bacilar ) - HUS Shigella cells invading intestinal epithelium L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.3. -Proteobacteria: Family Enterobacteriaceae Yersinia: Y. pestis PLAGUE (bubonic, pneumonic and speticemic). Zoonotic disease. Gangrene and black spots ( black death ) Buboes ( bubones ) Bacteria in lung tissue L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.3. -Proteobacterias: Vibrio Curved and straight rods Aquatic media Many species, some pathogenic: V. cholerae: cholera CHOLERA TOXIN L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.3. -Proteobacteria: Photobacterium Autoinduction: quorum sensing FMN luciferase FMNH2 + O2 + RCHO FMN + RCOOH + H2O + luz Inducer molecule: acyl homoserine lactone (AHL) NADH NAD+ L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.4. -Proteobacteria: Bdellovibrio Predator of other bacteria L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.4. -Proteobacteria: SULFATE (AND SULFUR) REDUCING BACTERIA (SRB)* Desulfo- (generally) or Desulfuro- Donors H2 They reduce sulfate/sulfur(acceptors) O. M. Final products: H2S Strict anaerobes (anoxic environments) Group I: Acetate cannot be used as donor Sulfate reducing bacteria Group II: H2and acetate can be used as donors Sulfate reducing bacteria Fixation of CO2 (acetil-CoA pathway) Group III: H2or organic matter as donors S and sulfite reducing bacteria (NEVER sulfate) L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014 *Some sulfate-reducing bacteria are not delta-proteobacteria
3. Phylum Proteobacteria 3.4. -Proteobacteria: SULFUR AND SULFATE REDUCING BACTERIA Marine sediments m.o. O2 +0.8 NO3- Mn+4 Fe+3 0 E (V) Consortia of SRB/methane oxidizing Archaea SO4-2 Stratification of electronic acceptors Limited organic matter Most important metabolism: sulfate reduction Competence (or not---) with methanogenic Archaea -0.2 CO2 L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.4. -Proteobacteria: MYXOBACTERIA Vegetative cells: long rods without flagella (names: Myxo ). Gliding. Fruiting bodies: cell-to-cell communication and differentiation L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.5. -Proteobacteria: Campylobacter and Helicobacter (both microaerophilic) Campylobacter: acute gastroenteritis, food borne disease (chicken meat ) L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
Helicobacter: gastritis and ulcers L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014 http://www.nobelprize.org/nobel_prizes/medicine/laureates/2005/marshall-lecture.pdf
Nitrospira (independent phylum) Nitrifying Archaea 3. Phylum Proteobacteria 3.6. OTHER PROTEOBACTERIA: NITRIFYING BACTERIA , , and Proteobacteria Electron donors: NH4+and NO2-/ Acceptor: O2 (Nitroso / Nitro ) They consume large amounts of substrate: chemolithoautotrops/ chemolithoheterotrophs Soils and waters; ammonia-rich sites; leaching of NO3- Nitrification NH4+ NO2- NO3- Nitrosomonas Nitrobacter AMO: ammonia monooxygenase NOR: nitrite oxidoreductase L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.6. OTHER PROTEOBACTERIA: SULFUR OXIDIZING BACTERIA , Proteobacteria Donors: H2S, S0, S2O32-, metallic suflides, H2 / Acceptor: O2 (sometimes NO3- ) S0 accumulation inside or outside the cell Acidithiobacillus: acidiphilic (A. ferrooxidans FeS2, Fe2+); autotrophs Thiomargarita: anaerobic oxidation (acceptor: NO3-) L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
Hydrothermal vents: H2S, H2, CO2, O2, N2... L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.6. OTHER PROTEOBACTERIA: PURPLE BACTERIA Anoxygenic phototrophs Reaction centre: bacteriochlorophylls Antenna pigments: BChl + carotenoids Photosynthetic systems: invaginations of the cytoplasmatic membrane L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.6. OTHER PROTEOBACTERIA: PURPLE BACTERIA ATP: Cyclic NAD(P)H: Reverse electronic flow photophosphorilation NAD(P)+ BChl EXCITED BChl EXCITED NAD(P)H Eo (-) cte- e- cte- e- H+ H+ H+ H+ H2S S0 Fe2+ e- BChl BChl Eo (+) BASAL BASAL S0 SO42- Fe3+ LIGHT NO external electron donors for ATP External electron donors for NAD(P)H Images property of Fernando Santos L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.6. OTHER PROTEOBACTERIA: PURPLE BACTERIA -Proteobacteria ( purple sulfur bacteria ): highly sensitive to O2; highly tolerant to [H2S] S compounds as electron donors. Photoautotrophs (Calvin cycle) Photoheterotrophs N2fixers -Proteobacteria ( purple nonsulfur bacteria ): more tolerance to O2; very sensitive to high [H2S] Chenoorganotrophs, Photoheterotrophs, photoautotrophs N2 fixers Anoxic areas blooms Meromictic lakes, microbial mats Sulfide-rich waters L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014 (SRB)
Metabolic diversity of nonsulfur purple bacteria L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
Microbial mats: stratification of microbial populations driven by environmental gradients Images property of Fernando Santos L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.6. OTHER PROTEOBACTERIA: METHANOTROPHS Methylotrophs vs. methanotrophs Biotic and abiotic methane Where does the methane come from? Methanotrophs vs. methanogens L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.6. OTHER PROTEOBACTERIA: METHANOTROPHS (Methylo ) Type I Type II L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
Methane as energy source Methano Methanol Formalhehyde CO2 Methane monooxygenase L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
Methane as carbon source Methane Methanol Formalhehyde biomass Type I Type II Ribulose monophosph ate pathway Serine pathway L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014
3. Phylum Proteobacteria 3.6. OTHER PROTEOBACTERIA: RICKETTSIAS / Proteobacteria Obligate intracellular parasites* Induce phagocytosis, do not survive outside hosts Highly specific energy metabolism*, synthesize few compounds Transmitted by arthropod vectors Damage to blood vessels Epidemic tifus (Rickettsia prowazekii) Vector: human louse Rocky Mountains spotty fever (Rickettsia rickettsii) Vector: tick *Q Fever (Coxiella) Vectors: tick, aerosols, dairy products One bacteria is enough!! (Biological weapon) Fever, headheach, weakness Rash Organ infections High mortality untreated L. 6: Bacteria Domain (II). 2nd Biology ARA 2013-2014 *Exception
