Bulk rna seq - PowerPoint PPT Presentation


The Ultimate Guide to Plastic Jumbo Bags

\nIn the dynamic landscape of modern industry and commerce, efficient packaging solutions are crucial for the transportation and storage of bulk materials. Plastic jumbo bags, also known as Flexible Intermediate Bulk Containers (FIBCs) or bulk bags, have emerged as indispensable tools for handling a

10 views • 5 slides


Purchase 1GB USB in Bulk for Efficient Data Management

While the digital world keeps growing, your storage solutions shouldn't shrink. Gone are the days of scrambling for bulky hard drives or relying on unreliable cloud storage. At Wholesale USB, we've got you covered with our straightforward and effective 1GB USB bulk option. Yes, we supply top-notch 1

7 views • 7 slides



Get Your Hands on Bulk USBs for All Your Needs

You get one USB drive and that is... history. In today's data-hungry world, a single flash drive just doesn't cut it anymore. You need a reliable supplier for bulk USB drives that can handle all your storage and distribution needs, and Wholesale USB helps you with just that.\nWe're your one-stop sho

7 views • 5 slides


Analyzing scRNA-seq Data Using Seurat: Practical Session Overview

Explore the practical steps involved in analyzing single-cell RNA sequencing (scRNA-seq) data with Seurat in this informative session. Learn how to install R and essential packages, download example datasets, understand raw data files, load data into R-Studio, and access data within a Seurat object.

3 views • 19 slides


Healthy Eating Made Easy- buy fruits and vegetables in bulk

Experience the convenience and savings with TijaraHub's to buy fruits and vegetables in bulk. With TijaraHub, stocking up on fresh produce has never been easier or more affordable. Elevate your healthy lifestyle while enjoying the perks of bulk buying through TijaraHub's diverse selection of premiu

4 views • 9 slides


Understanding Gene Translation: From RNA to Protein

Gene translation from RNA to protein involves the specific binding of transfer RNA molecules to messenger RNA codons, enabling the translation of nucleotide sequences into amino acids. Each amino acid is attached to a specific tRNA through activating enzymes, and the anticodon on tRNA pairs with the

0 views • 4 slides


Bioinformatics for Genomics Lecture Series 2022 Overview

Delve into the Genetics and Genome Evolution (GGE) Bioinformatics for Genomics Lecture Series 2022 presented by Sven Bergmann. Explore topics like RNA-seq, differential expression analysis, clustering, gene expression data analysis, epigenetic data analysis, integrative analysis, CHIP-seq, HiC data,

0 views • 36 slides


Understanding Powder Density in Industrial Pharmacy

Powder density plays a crucial role in industrial pharmacy, influencing aspects such as bulk density, tapped density, and composition of powders. The method of measuring bulk density involves pouring pre-sieved bulk drug into a graduated cylinder, while tapped density is determined by tapping the cy

0 views • 14 slides


Reliable FIBC Bulk Bags Exporter for Your Business Needs

Looking for a dependable FIBC bulk bags exporter? Look no further! Our company specializes in providing high-quality FIBC bulk bags that cater to various industrial requirements. With a strong commitment to quality and customer satisfaction, we ensur

1 views • 3 slides


Understanding 10X Single Cell RNA-Seq Analysis

This content delves into the intricacies of analyzing 10X single-cell RNA-Seq data, covering topics such as how 10X RNA-Seq works, evaluating CellRanger QC reports, dimensionality reduction techniques like PCA, tSNE, and UMAP, using the Loupe cell browser, and frameworks for scRNA analysis in R. It

0 views • 39 slides


Factors Affecting Bulk Density of Milk Powder

Bulk density of milk powder, a crucial property in production, is influenced by factors like the drying method, particle shape, moisture content, and processing conditions. Roller-dried powder tends to have lower density compared to spray-dried powder due to particle shapes and voids. Factors such a

5 views • 7 slides


Understanding 10X Single-Cell RNA-Seq Data Analysis

Explore the intricacies of analyzing 10X Single-Cell RNA-Seq data, from how the technology works to using tools like CellRanger, Loupe Cell Browser, and Seurat in R. Learn about the process of generating barcode counts, mapping, filtering, quality control, and quantitation of libraries. Dive into di

0 views • 34 slides


Exploring Nucleic Acids: DNA and RNA Structure and Function

Delve into the world of nucleic acids with a focus on DNA and RNA molecules. Discover the fundamental building blocks, such as nucleotides, and the role they play in genetic information storage and cell function. Learn about the unique characteristics of DNA like its double-helix structure and the s

0 views • 26 slides


Posttranscriptional Modification of RNA Overview

A primary transcript is the initial RNA copy of a transcription unit, subject to posttranscriptional modifications like cleavage and further alterations to form functional tRNAs, rRNAs, and mRNAs. In eukaryotic cells, pre-rRNAs and pre-tRNAs undergo processing by ribonucleases to yield mature RNA sp

0 views • 12 slides


RNA 3D Motif Analysis: Novel Sequence Variants Identification

A research project at Bowling Green State University aims to identify 3D motifs in RNA hairpin and internal loops using sequence and secondary structure information. The study focuses on finding likely sequence variants of known motifs, leveraging geometric considerations and basepair isostericity f

0 views • 28 slides


2017 Retail Channel Study - Avocado Category Channel Trends: Bagged vs. Bulk

This study delves into insights and growth opportunities for the avocado category by analyzing shopper purchase trends for bagged and bulk avocados across various retail channels. It provides a comparison of bagged vs. bulk avocado sales in grocery stores, Walmart, club stores, mass/supercenters, in

0 views • 58 slides


Bulk Loading Documents into Windchill - Step-by-Step Guide

Learn how to bulk load documents into Windchill using screen captures from Windchill 10.1 M040. This detailed guide covers all you need to know about bulk loading documents and parts, including saving files in CSV format, converting to XML, and loading files into Windchill server. Follow the step-by

0 views • 8 slides


Understanding the Tophat2 RNA-seq Pipeline

Tophat2 is a versatile pipeline aimed at aligning RNA reads to a genome, addressing gaps in alignments through innovative strategies. It involves the use of Bowtie for mapping and is written in C++, with a Python wrapper for seamless execution. The pipeline deals with large datasets and requires var

0 views • 13 slides


Exploring RNA-Seq Read Mapping and Quantitation

Dive into the world of RNA-Seq expression analysis through topics such as read mapping, quantitation, and the challenges faced in short-read mapping. Discover the typical parameters, design pressures, and basic ideas behind suffix tree index construction for efficient handling of large reads and dat

0 views • 19 slides


Understanding Transcription and Translation in Protein Synthesis

Protein structure is composed of amino acids arranged in specific orders to form polypeptides. This process involves transcription of DNA into RNA followed by translation of RNA into proteins. Replication plays a crucial role in preparing DNA for cell division. The central dogma of molecular biology

0 views • 24 slides


Understanding DNA Transcription and Translation in Biology

DNA transcription is the process where DNA is used as a template to create mRNA in the nucleus. This mRNA is complementary to the DNA and goes through initiation, elongation, and termination stages. RNA polymerases are essential for this process in eukaryotes. Various RNA polymerases have specific f

0 views • 47 slides


Understanding Transcription: The Initial Steps in Gene Expression

Gene expression involves two crucial phases - transcription and translation. Transcription, the first step, is the process where RNA is synthesized from DNA with the help of RNA polymerase. It begins with initiation, where the enzyme recognizes the promoter region and forms a complex with the DNA, m

0 views • 33 slides


Understanding Transcription in Biochemistry

Transcription is a crucial process where RNA is synthesized from DNA, involving complex steps of initiation, elongation, and termination. This process is regulated by specific DNA regions, proteins, and enzymes like DNA-dependent RNA polymerase. The differences between DNA and RNA synthesis lie in t

0 views • 15 slides


Overview of RNA Transcription Process

The process of RNA transcription involves three main stages: initiation, elongation, and termination. Initiation starts with RNA polymerase binding to a promoter, followed by the formation of a transcription initiation complex. Elongation involves RNA polymerase untwisting the DNA helix and adding n

0 views • 17 slides


Understanding Transcription and RNA Processing in Molecular Biology

Explore the intricate processes of transcription and RNA processing in molecular biology, delving into the types of RNA molecules, the differences between DNA and RNA, RNA polymerase enzymes, transcription factors, and the preinitiation complex. Visual aids and detailed descriptions help elucidate t

0 views • 55 slides


Understanding RNA Polymerases and Transcription Process

RNA polymerases play a crucial role in synthesizing cellular RNA through transcription, where RNA is created from a DNA template. This process involves specific requirements such as a DNA template, ribonucleoside triphosphates, and divalent metal ions. RNA polymerase catalyzes the initiation and elo

0 views • 15 slides


Novel RNA Viruses in Oysters Revealed by Virome Study

Oysters, as high-yield mariculture varieties, were investigated for novel RNA viruses using virome analysis. Eighteen new RNA viruses were identified, with evidence of genetic recombination. This study highlights the importance of advanced sequencing technologies in discovering viral pathogens in aq

0 views • 11 slides


Understanding ChIP-seq Data Analysis in Primate iPSCs

Analysis of ChIP-seq data in primate iPSCs reveals insights into regulatory differences, experimental systems, read subsampling, QC analysis, peak classification, and cross-species comparisons for transcriptional regulation studies. Balanced designs and functional validation of iPSCs contribute to a

0 views • 33 slides


Safety and Efficacy of RNA in Human Diet and Agricultural Crops

RNA is a common component of the human diet, with naturally occurring RNAi mechanisms in various organisms. While staple foods contain RNA, barriers in the human body limit systemic exposure, making oral ingestion ineffective for RNAi. Studies have shown minimal bioavailability and efficacy of dieta

0 views • 9 slides


Understanding RNA and Protein Synthesis Processes

RNA plays a crucial role in protein synthesis as it carries coded instructions from DNA. There are three types of RNA - mRNA, rRNA, and tRNA, each serving specific functions in the process. The steps of protein synthesis involve transcription, where DNA is copied into mRNA, and translation, where mR

0 views • 11 slides


Insights into RNA Secondary Structure Prediction by Kieran Andrews

Explore RNA secondary structure prediction methods and results, highlighting the role of tRNA and rRNA in cellular RNA composition. The process involves cycling through sequence folds, scoring based on base alignments, and identifying cis-regulatory elements. Results showcase paired bases in tRNA an

0 views • 7 slides


Exploring RNA Secondary Structure Prediction in Bioinformatics

RNA secondary structure prediction is a key concept in bioinformatics, encompassing features like stems, loops, and bulges. This presentation delves into the importance of RNA beyond mRNA, highlighting rRNA, tRNA, and regulatory RNA roles. The canonical base pairs A-U and C-G shape the single-strand

0 views • 20 slides


Understanding Nucleic Acids and RNA Molecules

Nucleic acids are linear polymers composed of nucleotides, with DNA and RNA being the main types. RNA consists of messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA), each playing a crucial role in protein synthesis. mRNA carries genetic information from DNA to ribosomes, tRNA transf

0 views • 8 slides


Mechanisms of Gene Regulation Through RNA Interference

Explore the intricate processes of gene expression control at the RNA level, focusing on ribo-regulation and RNA interference. Learn about mechanisms such as mRNA localization, degradation, splicing, and more, and discover the potentials of RNAi-based therapeutics through insightful learning objecti

0 views • 16 slides


Understanding Nucleic Acids: DNA, RNA, and Nucleotides

Nucleic acids are essential molecules that store genetic information and aid in protein production. This content delves into the monomeric structure of nucleotides, the differences between DNA and RNA, the unique characteristics of DNA's double helix structure versus RNA's single-stranded form, and

0 views • 11 slides


Decades of Marine RNA Virosphere Research

Research spanning over two decades has delved deep into the marine RNA virosphere, shedding light on the complex marine ecosystem and the characteristics of RNA viruses. Discoveries in deep marine virus taxonomy have led to significant taxonomic changes and advancements in virus classification and g

0 views • 10 slides


Introduction to RNA-Seq & Transcriptome Analysis Summary

Exploring a comprehensive guide to RNA-Seq and transcriptome analysis presented in a PowerPoint by Shounak Bhogale. The tutorial covers steps such as aligning RNA-Seq reads using STAR, counting reads with htseqCounts, finding differentially expressed genes with edgeR, and visualization with IGV. Det

0 views • 30 slides


Bulk RNA-seq Analysis: Basics and Downstream Insights

Bulk RNA-seq is a powerful method for analyzing gene expression in biological samples. This approach involves extracting and sequencing RNA to understand the presence and quantity of RNA molecules. The process includes steps like conversion to cDNA, sequencing reads, and downstream analysis over ann

0 views • 12 slides


New Features and Enhancements in GTAS 2.5 Bulk File Upload Process

Explore the revamped Bulk File Upload process in GTAS 2.5, including improved navigation, new menu options, and a comprehensive ATB Bulk File Processing Status dashboard for tracking file uploads and processing statuses efficiently.

0 views • 27 slides


Understanding Powder Density and Bulk Density in Industrial Pharmacy

Powder density and bulk density are crucial concepts in industrial pharmacy for measuring the amount of powder in a specified volume. Powder composition, including particles and voids, affects density measurements. Tapped density involves consolidation of powder through tapping, while measuring bulk

0 views • 13 slides