NCI Data Collections BARPA & BARRA2 serve as critical enablers of big data science and analytics in Australia, offering a vast research collection of climate, weather, earth systems, environmental, satellite, and geophysics data. These collections include around 8PB of regional climate simulations a

6 views • 22 slides

Middle East & Africa NGS Market by Offering (Kits [Library Prep, QC, DNA Extraction], System) Type (Genome, Exome, Targeted), Application (Reproductive, Oncology, Infectious, Drug Discovery), Technology (SBS, Nanopore, Nanoball, SMRT Seq) \u2013 Forecast to 2031\n

7 views • 4 slides

The integration of NLP into data pipelines represents a paradigm shift in data engineering, offering companies a powerful tool to reinvent their data workflows and unlock the full potential of their data. By automating data processing tasks, handling diverse data sources, and fostering a data-driven

9 views • 2 slides

The integration of NLP into data pipelines represents a paradigm shift in data engineering, offering companies a powerful tool to reinvent their data workflows and unlock the full potential of their data. By automating data processing tasks, handling diverse data sources, and fostering a data-driven

7 views • 2 slides

Explore the practical steps involved in analyzing single-cell RNA sequencing (scRNA-seq) data with Seurat in this informative session. Learn how to install R and essential packages, download example datasets, understand raw data files, load data into R-Studio, and access data within a Seurat object.

3 views • 19 slides

Meticulous Research\u00ae\u2013 a leading global market research company, published a research report titled \n\"Europe NGS Market by Offering (Kits [Library Prep, QC, DNA Extraction], System), Type (Genome, Exome, Targeted),\n Application (Reproductive, Oncology, Infectious, CVD, Drug Discovery), \

0 views • 3 slides

Meticulous Research\u00ae\u2013 a leading global market research company, published a research report titled \n\"Europe NGS Market by Offering (Kits [Library Prep, QC, DNA Extraction], System), Type (Genome, Exome, Targeted),\n Application (Reproductive, Oncology, Infectious, CVD, Drug Discovery), \

3 views • 3 slides

In today's data-driven world, organizations rely on robust data engineering pipelines to collect, process, and analyze vast amounts of data efficiently. At the heart of these pipelines lies data wrangling, a critical process that involves cleaning, transforming, and preparing raw data for analysis.

2 views • 2 slides

Meticulous Research\u00ae\u2013 a leading global market research company, published a research report titled \n\"Asia-Pacific Next Generation Sequencing (NGS) Market by Offering (Kits [Library Prep, QC, DNA Extraction],\n System) Type (Genome, Exome, Targeted) Application (Reproductive, Oncology) Te

1 views • 3 slides

Meticulous Research\u00ae\u2013 a leading global market research company, published a research report titled\n \"Europe NGS Market by Offering (Kits [Library Prep, QC, DNA Extraction], System), Type (Genome, \nExome, Targeted), Application (Reproductive, Oncology, Infectious, CVD, Drug Discovery), T

0 views • 3 slides

In current data world, businesses thrive on their ability to harness and interpret vast amounts of data. This data, however, often comes in raw, unstructured forms, riddled with inconsistencies and errors. To transform this chaotic data into meaningful insights, organizations need robust data wrangl

0 views • 2 slides

Meticulous Research\u00ae\u2013 a leading global market research company, published a research report titled \n\"Europe NGS Market by Offering (Kits [Library Prep, QC, DNA Extraction], System), Type (Genome, Exome,\n Targeted), Application (Reproductive, Oncology, Infectious, CVD, Drug Discovery), T

0 views • 3 slides

In today's data-driven world, the ability to seamlessly migrate and manage data is essential for businesses striving to stay competitive and agile. Data migration, the process of transferring data from one system to another, can often be a daunting task fraught with challenges such as data loss, com

1 views • 2 slides

Meticulous Research\u00ae\u2013 a leading global market research company, published a research report titled\n \"Asia-Pacific Next Generation Sequencing (NGS) Market by Offering (Kits [Library Prep, QC, DNA \nExtraction], System) Type (Genome, Exome, Targeted) Application (Reproductive, Oncology) Te

0 views • 3 slides

Delve into the Genetics and Genome Evolution (GGE) Bioinformatics for Genomics Lecture Series 2022 presented by Sven Bergmann. Explore topics like RNA-seq, differential expression analysis, clustering, gene expression data analysis, epigenetic data analysis, integrative analysis, CHIP-seq, HiC data,

0 views • 36 slides

Gene set enrichment tests help identify functional gene sets enriched in hit lists compared to background sets. Various biases (technical, biological, statistical) can lead to incorrect conclusions in data analysis, emphasizing the importance of recognizing and addressing them. Technical biases like

0 views • 29 slides

The study analyzed transcriptomic changes in peripheral blood mononuclear cells of International Space Station crew members. Blood samples were collected before and after spaceflight, and differentially expressed genes were identified using RNA-seq analysis. Several genes, including CDKN1A (p21) and

0 views • 12 slides

This content delves into the intricacies of analyzing 10X single-cell RNA-Seq data, covering topics such as how 10X RNA-Seq works, evaluating CellRanger QC reports, dimensionality reduction techniques like PCA, tSNE, and UMAP, using the Loupe cell browser, and frameworks for scRNA analysis in R. It

0 views • 39 slides

Data Governance and Data Analytics play crucial roles in transforming data into knowledge and insights for generating positive impacts on various operational systems. They help bring together disparate datasets to glean valuable insights and wisdom to drive informed decision-making. Managing data ma

0 views • 8 slides

Explore the intricacies of analyzing 10X Single-Cell RNA-Seq data, from how the technology works to using tools like CellRanger, Loupe Cell Browser, and Seurat in R. Learn about the process of generating barcode counts, mapping, filtering, quality control, and quantitation of libraries. Dive into di

0 views • 34 slides

Data preparation, also known as data pre-processing, is a crucial step in the data mining process. It involves transforming raw data into a clean, structured format that is optimal for analysis. Proper data preparation ensures that the data is accurate, complete, and free of errors, allowing mining

1 views • 37 slides

Explore a thorough examination of gene expression and regulatory potential using eCLIP profiles, shRNA, RNA-Seq, secondary structure conservation, and prioritized genes. Uncover insights on users' variants, regulator scores, nucleotide scores, RBP rank lists, mutation burden, and more. Dive deep int

3 views • 10 slides

Explore the impact and role of data utilization in organizations through the investigation of data collection methods, data quality, decision-making processes, reliability of collection methods, factors affecting data quality, and privacy considerations. Two scenarios are presented: data collection

1 views • 24 slides

Tophat2 is a versatile pipeline aimed at aligning RNA reads to a genome, addressing gaps in alignments through innovative strategies. It involves the use of Bowtie for mapping and is written in C++, with a Python wrapper for seamless execution. The pipeline deals with large datasets and requires var

0 views • 13 slides

Dive into the world of RNA-Seq expression analysis through topics such as read mapping, quantitation, and the challenges faced in short-read mapping. Discover the typical parameters, design pressures, and basic ideas behind suffix tree index construction for efficient handling of large reads and dat

0 views • 19 slides

Workshop focused on analyzing circulating miRNA changes associated with Alzheimer's and Parkinson's diseases using the Genboree Workbench and exceRpt small RNA-seq analysis pipeline. The study aimed to identify extracellular miRNA biomarkers correlating with disease status and progression, replicati

0 views • 20 slides

Ontology "BabyDayOut" is developed using RDF/RDFS to describe a picture. It includes classes such as Person, Animal, Baby, Picture, Man, and Gorilla with instances like John, KingKong, Jack, Peter, and Alex. Various relations like hasFriend, hasAnimalFriend, sonOf, depicts, hasEnemy, and hasTitle ar

0 views • 9 slides

Analysis of ChIP-seq data in primate iPSCs reveals insights into regulatory differences, experimental systems, read subsampling, QC analysis, peak classification, and cross-species comparisons for transcriptional regulation studies. Balanced designs and functional validation of iPSCs contribute to a

0 views • 33 slides

Exploring a comprehensive guide to RNA-Seq and transcriptome analysis presented in a PowerPoint by Shounak Bhogale. The tutorial covers steps such as aligning RNA-Seq reads using STAR, counting reads with htseqCounts, finding differentially expressed genes with edgeR, and visualization with IGV. Det

0 views • 30 slides

Learn about the roles of Data Protection Officers (DPOs), the Data Protection Act (DPA) of 2004, key elements of the act, definitions of personal data, examples of personal data categories, and sensitive personal data classifications. Explore how the DPO enforces privacy rights and safeguards person

0 views • 33 slides

Bulk RNA-seq is a powerful method for analyzing gene expression in biological samples. This approach involves extracting and sequencing RNA to understand the presence and quantity of RNA molecules. The process includes steps like conversion to cDNA, sequencing reads, and downstream analysis over ann

1 views • 12 slides

Explore the application of limma-voom, a statistical method to analyze gene expression data from RNA-Seq experiments. Understand how this approach addresses the variance issue in RNA-Seq data by applying weights. Utilize bottomly data from inbred mouse strains to identify differentially expressed ge

0 views • 11 slides

Delve into the world of genomics and bioinformatics through the Genetics and Genome Evolution (GGE) lecture series by Sven Bergmann. Explore topics such as RNA-seq analysis, differential expression, gene expression measurement techniques, and integrative analysis with epigenetic data. Gain insights

0 views • 37 slides

Explore the intricate process of RNA-Seq analysis including library preparation, reference-based analysis, sequence data processing, raw sequence quality control, FastQ format data, and quality assessment steps such as FastQC, base call quality, composition, duplication, and adapter trimming.

0 views • 81 slides

Exploring RNA-Seq data analysis focusing on mapping reads and estimating transcript abundance. Key topics include read mapping speed, quantitation methods, inferences on gene expression, and a simple model for understanding transcript abundance calculation. The process involves linking mapped reads

0 views • 13 slides

Explore the modENCODE project's uniform ChIP-Seq processing tools, outline of the Model Organism ENCyclopedia Of DNA Elements (modENCODE), funding information, DCC mandates, data availability on Amazon Cloud, and challenges in accessing the extensive modENCODE dataset.

0 views • 20 slides

Explore the delicate balance between employer policies and the use of permitted medical marijuana, focusing on Connecticut laws and regulations. Learn about the definitions, implications for the workplace, and the rights of qualifying patients under Conn. Gen. Stat. 21a-408 et seq.

0 views • 50 slides

Multiple enhancers play a crucial role in regulating gene expression in a cell, with approximately 3-5 enhancers associated per human gene. These enhancers are essential for tissue-specific expressions and are active within the same cell line. The use of multiple enhancers can impact gene expression

0 views • 30 slides

Explore essential strategies for analysing BS-Seq data, ranging from selecting appropriate methylation contexts to identifying coverage outliers and biases. Understand how to interpret data patterns, handle unusual findings, and mitigate potential errors, ensuring accurate methylation analysis resul

0 views • 40 slides

Plant bioinformatics researchers conducted experimental analyses and mapped gene regulatory networks using ChIP-Seq data. The studies involved exploring gene expression, regulatory interactions, and transcription factor binding sites. Techniques such as peak calling, motif finding, and peak annotati

0 views • 19 slides