Genomic tests - PowerPoint PPT Presentation


Construction of an Achievement Test

Learn about achievement tests, standardized tests, oral tests, essay tests, and more for student evaluation. This guide discusses various types of tests and their purposes in assessing student learning. Enhance your understanding of educational assessment methods with this comprehensive resource

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Genomic Inference of Human Population Size Changes Over Time

Explore the genomic inference of a severe human bottleneck during the Early to Middle Pleistocene transition, tracing the evolution of hominins over the last 4 million years, and studying essential events in the emergence of humans in the last one million years. Discover well-known human population

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Latest Developments in Genomic Medicine and NHS Genomic Strategy

The genomic medicine field is advancing rapidly, with a focus on enhancing healthcare services through genomic testing for prediction, prevention, diagnosis, and precision medicine. The NHS is actively integrating genomics into its healthcare system, aiming for equitable access to genomic testing. I

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Comprehensive Overview of Pulmonary Function Tests (PFTs)

Pulmonary Function Tests (PFTs) are vital for assessing pulmonary gas exchange through ventilation, diffusion, and lung perfusion. These tests include measurements of lung volume, airway patency, gas exchange efficacy, and pulmonary blood flow. PFTs offer benefits in diagnosing dyspnea, monitoring d

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Precision Oncology Research using Deep Learning Models

Lujia Chen, a Postdoc Associate at the University of Pittsburgh, focuses on developing deep learning models for precision oncology. By utilizing machine learning, especially deep learning models, Chen aims to identify cancer signaling pathways, predict drug sensitivities, and personalize cancer trea

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Understanding Verbal and Non-Verbal Tests

Verbal and non-verbal tests serve different purposes in assessing intelligence and skills. Non-verbal tests utilize images and diagrams to measure reasoning abilities without requiring reading or writing. Verbal tests, on the other hand, assess language-based skills through reading, writing, or oral

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Understanding Renal Function Tests and Kidney Health

Renal function tests are essential for diagnosing and monitoring kidney health. These tests assess functions like glomerular filtration, tubular reabsorption, and endocrine functions of the kidneys. Common indicators include serum urea, creatinine levels, and more. It's crucial to evaluate renal fun

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Understanding Different Types of T-Tests in Psychological Research

This article provides an overview of different types of t-tests used in psychological research, including independent t-tests for comparing two groups, paired or correlated t-tests for within-group comparisons, and the assumptions behind conducting these tests. It also includes examples of when to u

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Lab 2: DNA Extraction Techniques for Arthropods and Wolbachia

In this lab activity, students will learn how to isolate genomic DNA from arthropods and Wolbachia bacteria. The goal is to transition from fieldwork to molecular biology, utilizing DNA as a diagnostic tool. The activity involves extracting total genomic DNA from identified species and includes pre-

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Understanding Non-Parametric Tests and Their Applications

Non-parametric tests serve as valuable alternatives to parametric tests when data do not meet specific criteria. This article explores the concept of non-parametric tests, types of non-parametric tests, and provides insights on conducting the Mann-Whitney U Test using SPSS for practical research app

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Genomic Evaluation of a 2-Month-Old Female with Tetralogy of Fallot

This case involves a 2-month-old female with Tetralogy of Fallot, carrying a genetic variation in the 19p13.11 region. The evaluation process includes assessing genes, known dosage sensitivity, gene count, and detailed analysis of the duplication found in the DGV Gold Standard Dataset. The frequency

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Understanding Types of Test and Evaluation in Education

Explore the various types of tests used in education, including pre-tests, mastery tests, and diagnostic tests. Learn about different mediums for testing, such as oral, written, and performance tests. Discover the role of examinees in essay-type and objective-type tests. Lastly, delve into different

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Understanding Achievement and Aptitude Tests in Education

Explore the differences between achievement and aptitude tests, such as how they measure abilities and knowledge. Learn about teacher-made tests, standardized tests, low-stake, and high-stake tests. Discover the importance of achievement tests in evaluating present proficiency and aptitude tests in

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Gonorrhea Diagnostic Methods and Tests Overview

Dr. Mohammad Ahmad El Khayyat, an Assistant Professor in Dermatology, STDs, and Andrology, details the diagnostic methods and tests for gonorrhea. Various tests including Gram stain, culture, antigen detection tests, and nucleic acid amplification tests are discussed, highlighting sensitivity and sp

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Understanding Challenges and Gaps in Genetic and Genomic Testing for Breast Cancer Risk

The report highlights current challenges and identified gaps in genetic and genomic testing for breast cancer risk assessment. The workgroup aims to catalog existing materials, address terminology confusion, and improve public and clinician education. Challenges include complex terminology, uncertai

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Molecularly-Guided Therapy vs Platinum Chemotherapy in CUP Patients

This trial aims to compare the efficacy and safety of molecularly-guided therapy or cancer immunotherapy based on genomic profiling with platinum-based chemotherapy in patients with cancer of unknown primary site. The study design includes multiple treatment regimens guided by genomic profiles, with

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Patient Choice for Whole Genome Sequencing in NHS: Education & Training Slide Deck

Developed by Genomics Education Programme, these slides focus on the patient choice consent model for whole genome sequencing in NHS Genomic Medicine Service. The model aims to ensure informed choices for genomic testing, including participation in the National Genomic Research Library. It covers se

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Evaluating Genomic Science: Insight into Genome Canada's Mission and Impact

This conversation with Dr. Samantha Evans, Director of Evaluation at Genome Canada, delves into the importance of program evaluation in genomic science. Genome Canada aims to connect ideas, invest in science and technology, and maximize impacts across sectors. The evaluation process involves collect

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Precision Oncology and Genomic Changes in Cancer Treatment

Explore the intricate details of cancer treatment through precision oncology, focusing on cell of origin, genomic changes, tumor microenvironment, host factors, and response to various treatments such as chemotherapy, biological therapy, and immune therapy. The natural history and histology-guided c

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Can Multigene Tests Guide Adjuvant Treatment in Early Breast Cancer?

Breast cancer is heterogeneous, and predicting outcomes using clinical and pathologic features can be challenging. Genomic tests such as Oncotype DX, PAM50, and MammaPrint have been developed to aid in treatment decisions since 2002. Studies like the NSABP B-14 and B-20 trials have shown the benefit

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Understanding Ridge Regression in Genomic Selection

Explore the concept of ridge regression in genomic selection, involving the development of genomic selection methods, pioneers in implementation, fixed and random effects, and the over-fitting phenomenon. Learn how ridge regression addresses issues of over-fitting by introducing regularization param

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Qualitative Tests of Proteins & Amino Acids: Overview and Analysis

In this lab, you will delve into the qualitative tests for proteins and amino acids, understanding their structures, classifications, and importance in food and human nutrition. The tests include solubility tests and identification tests for both amino acids and proteins, revealing their presence an

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Decoding the Hidden Regulatory Codes Shaping Protein Evolution

The study explores the intricate relationship between genetic and regulatory codes that shape protein evolution. Discusses how duons, genomic footprints, and transcription factors densely populate and constrain protein-coding exons. Highlights how regulatory elements influence codon choice independe

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Qualitative Tests of Proteins & Amino Acids - Lab Analysis Overview

This lab analysis covers qualitative tests for proteins and amino acids, including solubility tests and identification tests for amino acids and proteins. Specific tests like Ninhydrin test for -L amino acids, Xanthoproteic test for aromatic amino acids, and lead sulfite test for sulfhydryl group de

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Insights into Gene Regulation through Genomic Data Analysis

Explore the intricate world of gene regulation and genomic data analysis through a comprehensive study presented at a faculty workshop in 2014. Delve into the evolution and classification of biology, the impact of genome sequencing on digitizing biology, and the potential of genetic information vari

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Genomics Facilitator's Toolkit Summary & Sample Requirements

This toolkit provides essential resources for healthcare professionals involved in genomics services, covering topics such as genomic medicine, whole genome sequencing, clinical genetic testing methods, interpretation of DNA variants, and more. It also details the specific sample requirements for di

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Genomic Selection in Dairy Cattle: Advantages, Disadvantages, and Impact

Genomic selection in dairy cattle focuses on specialized breeds like Holstein, Jersey, Brown Swiss, and Ayrshire. It brings reliable breeding values at a young age, higher success rates in obtaining top bulls, and lower costs for test proofs, leading to a shorter generation interval. While it offers

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Genomic Prediction of Feed Intake in U.S. Holsteins

This study discusses the inclusion of feed intake data from U.S. Holsteins in genomic prediction, focusing on residual feed intake (RFI) as a new trait. The research involves data from research herds and genotypes of cows, with genetic evaluation models and genomic evaluation for predicting feed int

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Genomic Imputation Pipeline Overview

This document outlines a genomic imputation pipeline for multiple GWAS studies using reference panels such as 1000 Genomes Phase I data. It covers steps like data matching, phasing, and imputation using tools like Beagle and Minimac. The expected output includes imputed dosages and quality measures.

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Evaluation of Genomic Deletion in a 4-Month-Old Male with Bilateral Microphthalmia

Clinical assessment was conducted on a 4-month-old male with bilateral microphthalmia due to a genomic deletion in the 13q12.11 region. The deletion encompasses part of a protein-coding gene and has been associated with various birth defects and developmental delays in previous cases. Detailed evalu

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Introduction to BED Files: An Overview of Browser Extensible Data Format

BED (Browser Extensible Data) files are commonly used for annotating genomic sequences by specifying ranges on chromosomes. They consist of required fields like chromosome name, start and end positions, and optional fields for additional information such as name, score, strand, and color representat

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Genomic Recursions in Genomic BLUP for Animal Breeding

Explore the application of genomic recursions in single-step genomic best linear unbiased predictor (BLUP) for genetic evaluations in animal breeding. Understand the significance of using genomic data to improve genetic selection, increase accuracy, shorten generation intervals, and enhance genetic

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Mainstreaming Genomic Medicine: 100,000 Genomes Project Update

The Mainstreaming Genomic Medicine post provides insights into the background and progress of the 100,000 Genomes Project, including details on genetic vs. genomic testing, the setup of NHS Genomic Medicine Centres, types of cancer included, and samples taken. It covers the project's inception, key

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DArT-2 Tests and Experiments Overview

The DArT-2 tests involve twin experiments - DArT-2 and DArT-Test, focusing on ensuring the performance of DArT-2 in studying underground argon. Various tests like electronic tests of the PDM and vacuum tests are conducted to guarantee proper operation. Challenges with vacuum sealing and solutions li

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Understanding the Differences Between Objective and Projective Tests

Objective tests aim to maximize objectivity by providing structured response options, while projective tests delve into hidden emotions and conflicts through ambiguous stimuli. Pros of objective tests include standardization and reliability, but projective tests offer unique insights based on indivi

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Genetic Analysis of 17p13.3 Deletion in a 10-Year-Old Female

This genetic case study involves a 10-year-old female with a de novo 17p13.3 deletion, presenting with mild intellectual disability and growth delay. The deletion overlaps with the Miller-Dieker syndrome critical region, impacting genes associated with lissencephaly and cognitive impairment. Through

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Understanding Mainstreaming in Genomic Testing for Lynch Syndrome

Mainstreaming in healthcare involves shifting genomic testing from Clinical Genetics to various specialties, such as cancer MDTs. This process impacts consent for genetic testing and result communication. NDRS data analyzes the time to diagnosis, while training and resources focus on why mainstreami

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Understanding Unit Testing in Software Engineering

Concept Software is a discipline comprising various code pieces. Testing these codes together is complex but vital in Software Engineering. The process includes early testing like unit tests, pairwise/multiple component testing, module testing, integration testing, user tests, alpha tests, beta test

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Concept Development and Implementation of Ridge Regression in Genomic Selection

This presentation delves into the concept development and implementation of ridge regression in genomic selection, emphasizing the importance of avoiding overfitting by regulating parameters and distinguishing between fixed and random effects. The pioneers of ridge regression and Bayesian methods ar

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Understanding Genome Browsers and their Significance in Genomic Research

Genome browsers are essential tools for visualizing complex genome information, integrating sequence data with annotations in a user-friendly graphical interface. They enable exploration of chromosomal regions, regulatory elements, and comparative genomics across different organisms. Key examples in

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