Sanger dna sequencing - PowerPoint PPT Presentation


Understanding DNA Mutations and Their Types

DNA mutations are changes in the DNA molecule that can lead to permanent alterations in the base sequence of daughter DNA. Causes include uncorrected errors, as well as damage from oxidative deamination, radiation, and chemicals. The types of mutations include point mutations, insertion mutations, d

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Comprehensive DNA Characterization Methods in Molecular Biology

Explore the various techniques involved in the characterization of DNA, including spectrophotometric assay, melting temperature determination, quantitative and qualitative analyses, DNA purity assessment, GC content calculation, and DNA denaturation processes. Learn how to determine DNA concentratio

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Understanding DNA Extraction from Strawberries in Molecular Genetics

In this molecular genetics lesson, students explore DNA extraction from strawberries. The content covers the structure of DNA, nucleotides, and the role of DNA in determining genetic information. Students learn about the components of nucleic acids, DNA functions, and the double helix structure of d

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Transformative Power of Sequencing in Molecular Biology

The falling costs of sequencing have revolutionized various fields like genetics, genomics, cell biology, microbiology, and evolutionary biology. Sequencing data has enabled us to understand genomes, revolutionize cell biology techniques, conduct comparative genomics, population genomics, and metage

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Understanding NGS and Fetal Fraction in Prenatal Screening

Next Generation Sequencing (NGS) plays a key role in prenatal testing by analyzing cell-free DNA (cfDNA) to determine fetal fraction and detect genetic anomalies like Down syndrome. The process involves DNA extraction, library construction, barcode labeling, sample pooling, quantification, and seque

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Understanding Sanger Sequencing: A Step-by-Step Guide

Explore the detailed procedure of Sanger sequencing, from sample collection to DNA extraction, gene amplification, and sequencing preparation. Learn about the components involved, such as polymerase, nucleotides, and dideoxynucleotides, to achieve accurate DNA sequencing results. Follow the chain-te

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Understanding the Structure and Importance of DNA

Explore the essential components and structure of DNA, including nucleotides, RNA, and the significance of DNA in carrying genetic information across generations. Learn about the four DNA nucleotides, how mononucleotides are formed, and the discovery of DNA's structure. Dive into base pairing and th

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Understanding the Relationship Between DNA and Protein Specificity

The relationship between an organism's DNA and protein specificity is intricate. DNA encodes the information for the sequence of amino acids in proteins, thereby determining their specificity. This process involves DNA directing the synthesis of specific RNA molecules, which are then translated into

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TB ONT Workshop NIMR August 2022: Extracting TB DNA Insights

Dr. Linzy Elton, a postdoctoral research associate at the Centre for Clinical Microbiology, explores the importance of extracting high-quality TB DNA for sequencing. The workshop delves into the challenges of extracting DNA from TB due to its complicated cell wall and outlines the biological safety

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Understanding DNA Ligation Techniques for Molecular Biology Applications

DNA ligation involves joining DNA fragments to vectors to create new DNA or plasmids. Methods include DNA ligase, T4 ligase, and terminal deoxynucleotidyl transferase. Linkers and adaptors play a key role in DNA cloning experiments by generating sticky ends for DNA cloning. The use of adaptors allow

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Understanding DNA Replication in Prokaryotes for B.Sc. Botany Hons. Students

Study material on DNA replication in prokaryotes focusing on key concepts like semiconservative mode of replication, involvement of enzymes, different models for understanding replication, and the bidirectional nature of DNA replication in prokaryotes. The material covers the process steps including

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Lab 2: DNA Extraction Techniques for Arthropods and Wolbachia

In this lab activity, students will learn how to isolate genomic DNA from arthropods and Wolbachia bacteria. The goal is to transition from fieldwork to molecular biology, utilizing DNA as a diagnostic tool. The activity involves extracting total genomic DNA from identified species and includes pre-

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Introduction to Phage DNA Integration in Bacterial Cells

Phage DNA can be introduced into bacterial cells through two methods: transfection and in vitro packaging. Transfection involves mixing purified phage DNA with competent E. coli cells, inducing DNA uptake via heat shock. In vitro packaging utilizes proteins coded by the phage genome, which can be pr

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Pulsed-Field Gel Electrophoresis: Separating Large DNA Molecules

Pulsed-Field Gel Electrophoresis (PFGE) is a technique developed to effectively separate large DNA molecules through the application of an electric field that periodically changes direction. This method, introduced by David C. Schwartz and Charles C. Cantor in 1984, revolutionized the resolution of

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Understanding DNA Sequencing: Principles, Applications, and Techniques

DNA sequencing plays a vital role in various fields such as research, diagnostics, biotechnology, forensics, and biological systematics. By determining the order of nucleotide bases in a DNA molecule, it helps in understanding genetic sequences, identifying mutations, and completing projects like th

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Strategies and Tactics in Mediation Sequencing Models

Negotiators and mediators employ various sequencing strategies and tactics to effectively manage complex social conflicts. Sequencing strategies outline the overall plan for addressing issues, while tactics consist of specific actions to achieve desired outcomes. General sequencing models include Gr

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Understanding DNA Evidence in Solving Crimes

DNA, or deoxyribonucleic acid, plays a vital role in solving crimes by linking suspects to evidence, identifying victims, connecting crime scenes, and more. Factors like environmental conditions can affect DNA evidence. CODIS database aids in identifying suspects through DNA profiles. Understanding

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Understanding Epigenetics: DNA Methylation and Histone Modification

Epigenetics refers to changes in gene expression without altering the DNA sequence. This involves processes like DNA methylation, histone modification, and microRNAs. DNA methylation is controlled by DNA methyltransferase enzymes and plays crucial roles in gene activation and silencing. Histone modi

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Understanding Recombinant DNA Technology and Gene Cloning

Recombinant DNA technology is crucial for developing new vaccines and pharmaceuticals by combining genetic material from various sources to create unique sequences. Techniques like transformation, non-bacterial transformation, and phage introduction are used to make recombinant DNA. Tools like enzym

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Understanding DNA Profiling: Techniques and Applications

DNA profiling, invented by Alec Jeffreys in 1985, is a technique used to distinguish between individuals of the same species based on their DNA. The process involves breaking down cells to release DNA, cutting the DNA into fragments using restriction enzymes, separating and analyzing fragments based

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DNA Extraction: A User's Manual for Plant Material

A step-by-step guide on preparing, extracting, and storing DNA from plant material for first-time users, specifically tailored for individuals in botanical fields. The manual covers materials needed, CTAB buffer mixture preparation, leaf material preparation, DNA extraction process, and proper stora

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Understanding DNA, Chromosomes, and Chromatin Structure

DNA is made up of genes, chromosomes, and chromatin. Genes carry vital information for protein synthesis, while chromosomes are condensed DNA required for cell division. Junk DNA are non-coding regions, and sister chromatids are identical DNA copies. Homologous chromosomes have matching structures,

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DNA Data Archival: Solving Read Consensus Using OneJoin Algorithm

DNA data storage presents challenges in archiving digital information efficiently due to the nature of biological media. This article delves into the complexities of DNA data storage, emphasizing the importance of robust archival solutions. The OneJoin algorithm offers a scalable and cross-architect

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Understanding Recombinant DNA and Gene Cloning

Recombinant DNA is artificially created by combining DNA from multiple sources into a single molecule. This process involves treating DNA with restriction endonucleases, such as BamHI, which cut at specific sites, resulting in sticky ends that can base pair with complementary DNA molecules. DNA liga

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Understanding Sequence Alignment in Next-Generation Sequencing Data

Sequence alignment plays a crucial role in analyzing Next-Generation Sequencing (NGS) data by identifying similarities between DNA, RNA, or protein sequences. Global and local alignment methods are used to arrange sequences and locate fragments derived from specific genes or transcripts. Challenges

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Understanding Sanger DNA Sequencing Procedure

Overview of Sanger (dideoxy) DNA sequencing, involving deoxynucleotides and dye-labeled dideoxynucleotides to image DNA band sizes. The simulation model includes steps like denaturing DNA, annealing primers, and synthesizing DNA chains using dNTPs and ddNTPs. The process culminates in electrophoresi

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Genomics Facilitator's Toolkit Summary & Sample Requirements

This toolkit provides essential resources for healthcare professionals involved in genomics services, covering topics such as genomic medicine, whole genome sequencing, clinical genetic testing methods, interpretation of DNA variants, and more. It also details the specific sample requirements for di

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Overview of Thermostable DNA Polymerases and Their Properties

Thermostable DNA polymerases play a crucial role in various molecular biology techniques, with Taq DNA polymerase being a household name due to its discovery in Thermus aquaticus. These enzymes catalyze DNA synthesis, require magnesium ions for activity, and exhibit optimal function at high temperat

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Understanding Sequencing Algorithms for Biological Sequences

Karla H. Hermann discusses specific algorithms for sequencing biological sequences, emphasizing the importance of clear experimental questions, good planning, and careful sample handling. Techniques such as RNA sequencing with gel beads and 10x Genomics software are highlighted. The process of picki

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Understanding DNA Transformation in Bacterial Cells

DNA transformation is a crucial process in genetic engineering, where foreign DNA is introduced into bacterial cells such as E. coli. This process, known as transformation, involves making the cells competent to uptake DNA through physical and chemical treatments. The uptake of DNA occurs after trea

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Understanding DNA Structure: A Comprehensive Overview

DNA, or deoxyribonucleic acid, is a fundamental molecule in genetics. It consists of two antiparallel polynucleotide chains made up of monomer units containing sugars, phosphates, and nitrogenous bases. The structure of DNA includes deoxyribose sugar, phosphate groups, and nitrogenous bases like ade

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Understanding DNA Replication Process in Living Organisms

DNA replication is a fundamental biological process where an original DNA molecule produces two identical copies. This process involves initiation, elongation, and termination stages, utilizing replicator and initiator proteins. The DNA is unwound and replicated with the help of enzymes like helicas

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Understanding DNA in Forensic Science: Solving Crimes with Evidence

DNA, or deoxyribonucleic acid, plays a crucial role in solving crimes by providing unique genetic information that can link suspects to evidence, identify victims, and link crime scenes. Factors such as environmental conditions can influence the reliability of DNA evidence. CODIS, the Combined DNA I

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DNA Extraction from Blood: Methods and Protocol

Studying DNA is crucial for disease prevention, diagnosis, and treatment. This guide provides a step-by-step protocol for extracting DNA from blood, involving procedures like cell lysis, protein and RNA removal, DNA precipitation, and final nucleic acid determination. Key steps include using reagent

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Understanding DNA and Genetics: A Comprehensive Overview

Living things store, retrieve, transmit, and respond to information essential for life processes. This encompasses the heritability of genetic traits through DNA and RNA, the discovery of the double helix structure of DNA, and key experiments validating DNA as the heritable molecule. Explore the com

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Understanding DNA Fragment Analysis Through Polyacrylamide Gel Electrophoresis

Polyacrylamide gel electrophoresis is a technique used to separate DNA fragments based on size. By casting a gel and running an electric current through it, terminated DNA fragments can be separated and visualized using isotopes. This process allows for the analysis of DNA fragments differing in siz

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Understanding NGS Applications in Bioinformatics

Explore the world of Next-Generation Sequencing (NGS) applications in bioinformatics, covering topics such as RNA sequencing, big data challenges, storing genomic datasets, querying genetic information, and data visualization. Dive into the complexities of sequencing technologies, gene expression co

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Understanding DNA Structure, Replication, and Proofreading

Exploring the intricate world of DNA, this module delves into the structure of DNA, highlighting nucleotides, nitrogenous bases, and the double helix. It emphasizes how DNA stores genetic information in genes and undergoes replication through a semi-conservative model. The process of DNA replication

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Understanding DNA Fingerprinting and Its Applications

DNA fingerprinting, also known as DNA profiling, is a crucial technique used in forensic labs for identifying suspects or determining paternity. By cutting DNA with restriction enzymes and using gel electrophoresis, DNA fragments are separated according to size to create unique profiles. This highly

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Understanding Different Forms of DNA Structures

DNA can exist in various forms such as single-stranded, double-stranded, and mixed forms. The primary, secondary, and tertiary/quaternary structures play crucial roles in determining the overall structure of DNA. Forms like A-DNA and B-DNA have distinct characteristics and are commonly found in diff

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