Optical genome mapping - PowerPoint PPT Presentation


Gene Therapy and Genome Editing Technology

This article provides insights into the status, regulatory considerations, and delivery methods of gene therapy and genome editing technologies. It discusses approved gene therapies in the US, human genome editing in clinical applications, and the regulatory authority of the FDA over gene therapy. T

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Insights into Genome Assembly and Shotgun Sequencing

Explore the world of genome assembly, shotgun sequencing, and the fundamental concepts behind deriving genomes from large sets of sequencing reads. Learn about the complexity and core algorithms involved in contemporary genome assembly processes. Discover how the shotgun concept has revolutionized g

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Sudden Death and Cardiomyopathy Associated with LMNA in Nova Scotia Duck Tolling Retriever

A study on sudden death and cardiomyopathy in Nova Scotia Duck Tolling Retrievers due to LMNA association. The research includes genetic mapping, genotype verification, and functional predictions on Lamin A/C effects. Echocardiogram findings, pedigree data, genome-wide association study, whole-genom

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Understanding Genome-Wide Association Studies in Statistical Genetics Workshop

Explore the essentials of Genome-Wide Association Studies (GWAS) and genetic data quality control as presented by Daniel Howrigan in the 2023 workshop. Delve into the goals of GWAS, genetic data characteristics, SNP variations, and genotyping techniques. Gain insights into moving from trait heritabi

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Channelization to Include Optical Bands in IEEE 802.11 Standards

This document discusses the proposal to incorporate optical bands into the channelization framework of the IEEE 802.11 standard. It aims to align the channelization approach for integrated LC with that of mm-wave technology in the IMMW scope. The contribution highlights recent works, emphasizing the

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Understanding Relational Database Design and Mapping Techniques

Explore the process of mapping Entity-Relationship (ER) and Enhanced Entity-Relationship (EER) models to relational databases. Learn about relational model concepts, mapping algorithms, and the goals and steps involved in the mapping process. Discover how to preserve information, maintain constraint

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Optical Properties of Optically Active Compounds

Circular dichroism and optical rotatory dispersion are important techniques for studying the optical properties of optically active compounds. Circular dichroism measures the differential absorption of left and right circularly polarized light components, while optical rotatory dispersion studies th

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Understanding Optical Telescope Types and Lens-Maker's Formula

Optical telescopes utilize lenses or mirrors to collect and focus light for imaging celestial objects. The lens-maker's formula is crucial for determining the focal length of lenses, considering factors like index of refraction and radii of curvature. Different lens configurations and materials help

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Overview of Optical Fibre Technology and Applications

Optical fibre technology, spearheaded by Dr. Prabodh Sahai Saxena, revolutionizes communication systems through light transmission. This cutting-edge technology utilizes fibre optics made of glass or plastic to carry light signals, offering advantages like high bandwidth, low signal loss, and no ele

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Evolution of Optical Technology: From Telegraph to Photonic Integrated Circuits

The journey of optical technology evolution spans from the invention of the telegraph in 1836, through the introduction of optical fibers in 1978, to the development of photonic integrated circuits in the present era. Key milestones include the advent of optical amplifiers in 1990, the emergence of

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Understanding a Complex KMT2A Rearrangement in AML with Optical Genome Mapping

A case report explores the use of optical genome mapping (OGM) to unravel a complex KMT2A rearrangement in an AML patient. Traditional cytogenetic analyses identified translocations and rearrangements involving chromosomes 10 and 11, leading to the fusion of genes KMT2A and MLLT10. OGM technique, ut

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Understanding the Cancer Genome Atlas (TCGA) Project

The Cancer Genome Atlas (TCGA) project, initiated in 2005, aims to identify genetic mutations in cancer through genome sequencing. Supervised by the Center for Cancer Genomics, TCGA has expanded over the years, publishing numerous research articles and involving various tumor types. The project has

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Mapping Methodology for Establishing ESCO Relations

Learn how to set up teams, collect resources, compare classifications, and establish mapping relations for ESCO implementation projects. Get insights on using computer-assisted suggestions, updating mapping tables, and selecting mapping projects. Explore techniques for navigating classifications, br

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Fiber Optic Communication System Overview

This article presents a detailed explanation of a point-to-point fiber optic communication system, outlining the process from voice conversion to signal transmission and reception. It discusses the advantages and limitations of optical communication systems, along with numerical examples related to

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Optical Equipment Safety Review and Hazard Analysis

This document provides an in-depth review of the safety considerations for the ATST optical equipment, focusing on potential hazards associated with the M2 Mirror, Heat Stop Assembly, and other critical components. The Preliminary Hazard Analysis identifies various risks, causes, and recommended act

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Evaluating Genomic Science: Insight into Genome Canada's Mission and Impact

This conversation with Dr. Samantha Evans, Director of Evaluation at Genome Canada, delves into the importance of program evaluation in genomic science. Genome Canada aims to connect ideas, invest in science and technology, and maximize impacts across sectors. The evaluation process involves collect

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Overview of Laser Delivery Systems for Surgical Procedures

Institute of Laser for Postgraduate Studies at the University of Baghdad, led by Assist. Prof. Dr. Lutfi Ghulam Awazli, focuses on laser delivery systems in surgical procedures. The systems discussed include optical fibers, articulated arms, hollow waveguides, and free beams. Optical fibers, compose

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Understanding Optical Storage Technology

Optical storage technology originally designed for audio offers a capacity of 650MB, providing over 70 minutes of audio playback. Data is recorded digitally on a polycarbonate disk's surface as microscopic pits. The disk is organized in a spiral track with sectors of the same length arranged in bloc

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Exploring Texture Mapping in Computer Graphics

Delve into the world of texture mapping as a solution to the smoothness of polygons in computer graphics. Learn how to create textured scenes using techniques such as bump mapping and environmental mapping. Discover the process of representing textures, working with curved surfaces, and mapping onto

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Advances in Optical Bench Technology for Gravitational Wave Detectors

This content discusses the latest advancements in optical bench technology for gravitational wave detectors, focusing on precise measurements of back-scattered light, development of new optical cavities, and testing of Sagnac interferometers. Key objectives include improving suspension controls, red

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Optical Alignment Using Beam Triangle Opti 521 Phil Scott

This presentation delves into the intricate process of optical alignment using a beam triangle, focusing on defining optical and mechanical axes, addressing alignment challenges, degrees of freedom for various elements, and the importance of setting up a beam triangle for accurate alignment. The con

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Advancements in Genome Alignment and Sequencing Techniques

Genome alignment plays a crucial role in understanding biological processes and evolutionary history. With the rise of whole genome sequencing, methods such as constrained alignment and longest increasing subsequence have been employed for accurate variant detection. Tools like BLAST, hash tables, a

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Transimpedance Amplifiers in CMOS Technology for Optical Communications at 40 Gb/s

This research by Joseph Chong at Virginia Tech delves into the use of transimpedance amplifiers (TIAs) in CMOS technology for optical communications operating at a data rate of 40 Gb/s. The study outlines the motivation behind the project, the role of TIAs in optical receivers, TIA circuit topologie

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Proper Care and Maintenance of Optical Equipment to Prevent Infections

Regular examination and proper cleaning of tonometer prisms are essential to reduce the risk of transmitting infections during eye examinations. Disinfection and sterilization processes are crucial in maintaining optical equipment hygiene. Different disinfectants and physical methods can be used to

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Optical Frequency Interferometer Bench Analysis

Detailed examination of the optical setup for an Optical Frequency Interferometer (OFI) system, including the input/output configurations with various optical components such as prisms, crystals, and wave plates. The analysis focuses on the path and behavior of beams within the system, considering r

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Genome Sciences 373: Informatics Quiz, Python Dictionaries, and Conditional Statements Overview

Today's session covers topics such as Python dictionaries with in-class examples, iterating through dictionary entries, counting repeating characters in a string, and understanding if/elif/else statements. The session also includes a discussion on combining tests in Python and comparisons operators.

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Evolution of Optical Fiber Technology

Optical fiber technology has a rich history starting from John Tyndall's demonstrations in 1870 to the development of flexible fiberscopes by Hopkins and Kapany. This technology revolutionized communication systems and medical diagnostics, enabling the transmission of information through thin glass

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Optical Image Formation: Principles and Conditions

Understanding the principles and conditions governing optical image formation, including the role of broad bundles of rays, wave surfaces, magnification ratios, and axially-symmetric optical systems. Explore the conditions for imaging line segments, optical path lengths, and the general criteria for

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Optical Testing Setup Procedures for Vacuum Windows and Polarizers

Detailed procedures for optical testing setups involving vacuum windows, polarizers, rotation stages, translation stages, photodiodes, scopes, power meters, and more. The process includes preparing the initial state, rotating analyzers, monitoring transmission, and verifying the direction and magnit

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Understanding Genetic Disorders and the Human Genome Project

The Human Genome Project, completed in 2003, aimed to identify all human genes and DNA sequences. Genetic disorders, like autosomal disorders and Huntington's disease, can result from mutations at different levels, affecting single genes, chromosomes, or multiple genes. Albinism and cystic fibrosis

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Evaluation of PacBio Sequencing to Improve Sunflower Genome Assembly

Presentation at the Sunflower Genome Consortium Meeting in San Diego discussed the use of PacBio sequencing to enhance the sunflower genome assembly, with evaluations on PacBio data's effectiveness at locus and genome scales. Results highlighted challenges and successes in improving assembly quality

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Understanding Plastic Injection Molding for Optical Components

Plastic injection molding is a cost-effective method for mass-producing optical components, offering an economical alternative to glass. This process involves designing molds, considering factors like shrinkage and surface equations, ensuring smooth mold flow, and regulating fluid flow through gates

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GenPIP: In-Memory Acceleration of Genome Analysis

GenPIP is an innovative system that accelerates genome analysis through tight integration of basecalling and read mapping. By utilizing chunk-based pipelines and early rejection techniques, GenPIP optimizes data processing, reducing wasted computation and data movement. The system outperforms existi

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Importance of Functional Annotation of Animal Genomes in NIH Research

Functional Annotation of Animal Genomes (FAANG) is crucial for associating sequence variation with quantitative phenotypes in domestic animals, serving as important models for human health, disease, and ecology. The NIH actively participates in various genome projects involving cattle, horses, and c

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GEBCO Technical Sub-Commission on Ocean Mapping (TSCOM) Overview

Technical Sub-Commission on Ocean Mapping (TSCOM) is a key component of the GEBCO program, established in 2006 to provide expertise in seafloor mapping and discuss emerging technologies. TSCOM serves as an authoritative source for bathymetric and hydrographic data and offers ongoing advice to associ

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Virtual Network Mapping: A Graph Pattern Matching Approach

Virtual Network Mapping (VNM) involves deploying virtual network requests in data center networks in response to real-time demands. It facilitates the deployment of virtual networks on physical machines by mapping virtual nodes and links onto substrate nodes and paths, ensuring constraints are met.

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Lab 3: Centering Optical Elements & Systems with Precision

Centering optical elements and systems accurately is crucial for optical alignment processes. This lab focuses on using an air bearing rotary table and dial indicators to achieve precise centering. The equipment used includes PSM, displacement indicators, adjustment screws, and magnetic mounts. Prop

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Understanding the Morphology and Genome Organization of NDV

NDV, a pleomorphic virus, has an irregular spherical shape with filamentous features. Its genome consists of a single-stranded RNA with six genes arranged in a specific order. The virus contains a lipoprotein envelope with short spikes and a helical nucleocapsid core to protect the RNA. The genomic

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Understanding GWAS: A Brief Overview of Genetic Association Studies

GWAS, or Genome-Wide Association Studies, are a method used to map genes associated with traits or diseases by analyzing genetic markers throughout the genome. This process involves statistically testing the association between SNPs and traits using regression or chi-squared tests in a hypothesis-fr

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Understanding ISO 10110 Optical Drawing Standards

ISO 10110 Optical Drawing Standards provide guidelines for preparing drawings of optical elements and systems, essential for interpreting optical drawings accurately. The standard includes 13 parts covering aspects such as material imperfections, surface form tolerances, and more. Compliance with IS

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