Genome wide association test - PowerPoint PPT Presentation


Nevada Restaurant Association Media Kit

Founded in 1982, the Nevada Restaurant Association is dedicated to promoting, protecting, and educating the thriving restaurant industry in Nevada. With a focus on offering resources, networking opportunities, and training, the association plays a crucial role in advancing and safeguarding the busin

0 views • 11 slides


Gene Therapy and Genome Editing Technology

This article provides insights into the status, regulatory considerations, and delivery methods of gene therapy and genome editing technologies. It discusses approved gene therapies in the US, human genome editing in clinical applications, and the regulatory authority of the FDA over gene therapy. T

2 views • 27 slides



Insights into Genome Assembly and Shotgun Sequencing

Explore the world of genome assembly, shotgun sequencing, and the fundamental concepts behind deriving genomes from large sets of sequencing reads. Learn about the complexity and core algorithms involved in contemporary genome assembly processes. Discover how the shotgun concept has revolutionized g

2 views • 66 slides


Sudden Death and Cardiomyopathy Associated with LMNA in Nova Scotia Duck Tolling Retriever

A study on sudden death and cardiomyopathy in Nova Scotia Duck Tolling Retrievers due to LMNA association. The research includes genetic mapping, genotype verification, and functional predictions on Lamin A/C effects. Echocardiogram findings, pedigree data, genome-wide association study, whole-genom

0 views • 13 slides


Understanding Genome-Wide Association Studies in Statistical Genetics Workshop

Explore the essentials of Genome-Wide Association Studies (GWAS) and genetic data quality control as presented by Daniel Howrigan in the 2023 workshop. Delve into the goals of GWAS, genetic data characteristics, SNP variations, and genotyping techniques. Gain insights into moving from trait heritabi

0 views • 35 slides


Effective Strategies for Overcoming Test Anxiety

Learn practical methods to combat test anxiety in this 1-hour workshop by CCAMPIS Kayla Taylor. Topics covered include avoiding test anxiety, preparing effectively for tests, identifying and reducing sources of anxiety, quelling anxiety, test-taking strategies, and stress management. The PASS method

0 views • 13 slides


Understanding Software Testing: Test Cases, Selection, and Execution

Software testing plays a crucial role in identifying and resolving issues within software products. Test cases, selection, and execution are fundamental aspects of the testing process. Test cases define conditions for testing software functionality, with a focus on repeatability and data specificity

2 views • 36 slides


Understanding Transcription and Translation of Virus Genome

The lecture covers the transcription and translation processes of virus genomes, including the Baltimore classification system, transcription control in eukaryotes, and the role of transcription factors in gene expression. It explores how different viruses replicate based on their genome type and me

0 views • 14 slides


Genome Assembly

Genome assembly is a technique to assemble short DNA fragments into a organized format.

0 views • 15 slides


Understanding Coagulase Test in Microbiology

The Coagulase test is a crucial microbiological method used to differentiate Staphylococcus aureus (Coagulase Positive) from other Staphylococci (Coagulase Negative). By detecting the presence of the enzyme coagulase, this test helps identify pathogenic strains of Staphylococcus that can cause serio

2 views • 28 slides


Patient Choice for Whole Genome Sequencing in NHS: Education & Training Slide Deck

Developed by Genomics Education Programme, these slides focus on the patient choice consent model for whole genome sequencing in NHS Genomic Medicine Service. The model aims to ensure informed choices for genomic testing, including participation in the National Genomic Research Library. It covers se

0 views • 34 slides


Understanding a Complex KMT2A Rearrangement in AML with Optical Genome Mapping

A case report explores the use of optical genome mapping (OGM) to unravel a complex KMT2A rearrangement in an AML patient. Traditional cytogenetic analyses identified translocations and rearrangements involving chromosomes 10 and 11, leading to the fusion of genes KMT2A and MLLT10. OGM technique, ut

3 views • 5 slides


Understanding the Cancer Genome Atlas (TCGA) Project

The Cancer Genome Atlas (TCGA) project, initiated in 2005, aims to identify genetic mutations in cancer through genome sequencing. Supervised by the Center for Cancer Genomics, TCGA has expanded over the years, publishing numerous research articles and involving various tumor types. The project has

0 views • 7 slides


Polymorphism and Variant Analysis Lab Exercise Overview

This document outlines a lab exercise on polymorphism and variant analysis, covering tasks such as running Quality Control analysis, Genome Wide Association Test (GWAS), and variant calling. Participants will gain familiarity with PLINK toolkit and explore genotype data of two ethnic groups. Instruc

0 views • 43 slides


Evaluating Genomic Science: Insight into Genome Canada's Mission and Impact

This conversation with Dr. Samantha Evans, Director of Evaluation at Genome Canada, delves into the importance of program evaluation in genomic science. Genome Canada aims to connect ideas, invest in science and technology, and maximize impacts across sectors. The evaluation process involves collect

0 views • 36 slides


Advancements in Genome Alignment and Sequencing Techniques

Genome alignment plays a crucial role in understanding biological processes and evolutionary history. With the rise of whole genome sequencing, methods such as constrained alignment and longest increasing subsequence have been employed for accurate variant detection. Tools like BLAST, hash tables, a

0 views • 11 slides


Managing Test Anxiety Tips for Success in Illinois Licensure Exam

Successfully passing the Illinois licensure test requires not only content knowledge but also effective test-taking strategies and managing test anxiety. This guide provides valuable tips on addressing test anxiety before the exam, including putting things in perspective, recalling past successes, u

0 views • 14 slides


Understanding DNA: A Journey from Friedrich Miescher to Genes and Function

DNA, the hereditary basis of life, was first discovered by Friedrich Miescher in 1869. It consists of chromosomes, plasmids, and organellar DNA, collectively known as the genome. Genes, sequences of DNA, encode proteins and RNA, essential for an organism's functions. The genome is divided into chrom

0 views • 17 slides


Exploring the Evolution of Molecular Biology: From DNA Discovery to Genome Complexity

Uncover the fascinating journey of molecular biology, tracing key milestones from the discovery of DNA to the intricate structure of genes and genomes. Dive into historical breakthroughs, such as understanding the role of genes in producing proteins, the double helix structure of DNA, and the comple

2 views • 30 slides


Understanding Chromatin Organization and Chromosome Structure in Molecular Biology

Chromosomes are the carriers of genetic information in cells, containing genes made of DNA. Chromatin, composed of DNA wrapped around histone proteins, plays a crucial role in organizing genetic material. Humans have 23 pairs of chromosomes, and the Human Genome Project aims to map the human genome.

0 views • 21 slides


Introduction to Genome Informatics: Course Logistics and Algorithm Concepts

This content provides information about a Genome Informatics course, including course logistics, homework policies, and contact details. It also introduces fundamental concepts such as algorithms, their key features, and examples like finding the smallest number among inputs. The course emphasizes l

0 views • 30 slides


Genome-Wide Association for Drought Tolerance in Potato Study

PhD student João Vitor Nomura is conducting a Genome-Wide Association study for drought tolerance in potatoes at the University of São Paulo and the University of Wisconsin-Madison. The research focuses on adapting potato varieties to extreme heat waves and improving food security. Different abiot

0 views • 19 slides


Genome Sciences 373: Informatics Quiz, Python Dictionaries, and Conditional Statements Overview

Today's session covers topics such as Python dictionaries with in-class examples, iterating through dictionary entries, counting repeating characters in a string, and understanding if/elif/else statements. The session also includes a discussion on combining tests in Python and comparisons operators.

0 views • 41 slides


Insights into Gene Regulation through Genomic Data Analysis

Explore the intricate world of gene regulation and genomic data analysis through a comprehensive study presented at a faculty workshop in 2014. Delve into the evolution and classification of biology, the impact of genome sequencing on digitizing biology, and the potential of genetic information vari

0 views • 18 slides


Update on UE Beam Assumption for RRM Test Cases in 3GPP Meetings

The latest developments in 3GPP meetings regarding UE beam assumption for RRM test cases are outlined. Discussions include the need for UE beam type assumptions, updates to test cases for FR2, and upcoming presentations focusing on specific test cases and beam assumptions per test group. Test purpos

0 views • 9 slides


IEEE 802.11-20/0834r1: Recap of Association and Fast BSS Transition

The document presents insights into tentative (re)association for non-AP MLDs, focusing on addressing data delivery interruptions during roaming and association with new access points. It covers necessary actions before data transfer, open system authentication, association operations, and fast BSS

0 views • 17 slides


Understanding Genetic Disorders and the Human Genome Project

The Human Genome Project, completed in 2003, aimed to identify all human genes and DNA sequences. Genetic disorders, like autosomal disorders and Huntington's disease, can result from mutations at different levels, affecting single genes, chromosomes, or multiple genes. Albinism and cystic fibrosis

0 views • 37 slides


Evaluation of PacBio Sequencing to Improve Sunflower Genome Assembly

Presentation at the Sunflower Genome Consortium Meeting in San Diego discussed the use of PacBio sequencing to enhance the sunflower genome assembly, with evaluations on PacBio data's effectiveness at locus and genome scales. Results highlighted challenges and successes in improving assembly quality

0 views • 15 slides


GPress: A Framework for Querying Genome Annotation Files in Compressed Form

Genome projects generate large GFF files which require significant storage space. GPress offers a solution by compressing GFF files while allowing quick searches and random access. The framework addresses challenges faced by current GFF utilities, providing a more efficient approach to managing and

0 views • 24 slides


GenPIP: In-Memory Acceleration of Genome Analysis

GenPIP is an innovative system that accelerates genome analysis through tight integration of basecalling and read mapping. By utilizing chunk-based pipelines and early rejection techniques, GenPIP optimizes data processing, reducing wasted computation and data movement. The system outperforms existi

0 views • 28 slides


Importance of Functional Annotation of Animal Genomes in NIH Research

Functional Annotation of Animal Genomes (FAANG) is crucial for associating sequence variation with quantitative phenotypes in domestic animals, serving as important models for human health, disease, and ecology. The NIH actively participates in various genome projects involving cattle, horses, and c

0 views • 10 slides


Understanding Y Chromosomal Haplogroups in Genetic Studies

Exploring the utility of non-recombining paternal ancestry information in Genome-Wide Association Studies (GWAS) through the analysis of Y chromosomal haplogroups. This review delves into the implications of using Y chromosome and mitochondrial DNA data in tracing human migrations, ancestry, bottlen

0 views • 27 slides


Insights into NP-Hard Problems in Molecular Biology and Genetics

Understanding the complexity of NP-Hard Problems arising in molecular biology and genetics is crucial. These problems involve genome sequencing, global alignment of multiple genomes, identifying relations through genome comparison, discovering dysregulated pathways in human diseases, and finding spe

0 views • 24 slides


Efficient Ways to Download Genome Files for Bioinformatics Analysis

Obtain valuable insights into retrieving genome files for bioinformatics analysis utilizing multiple methods such as connecting via Finder, using Filezilla for FTP access, and executing curl commands on Xanadu. Learn how to access coding sequences, feature tables, nucleotide sequences, and encoded p

0 views • 38 slides


Survey of Structural Properties of Different Classes of Viruses

Viruses are small obligate intracellular parasites that require living hosts for multiplication. They lack ribosomes and metabolic enzymes, relying on host cells for replication. Viruses vary in size, shape, and genome organization, with classification based on morphology, physicochemical properties

0 views • 31 slides


Understanding the Morphology and Genome Organization of NDV

NDV, a pleomorphic virus, has an irregular spherical shape with filamentous features. Its genome consists of a single-stranded RNA with six genes arranged in a specific order. The virus contains a lipoprotein envelope with short spikes and a helical nucleocapsid core to protect the RNA. The genomic

0 views • 35 slides


Understanding Human Genetic Variation and Its Implications

These slides explore the connection between genetic variations and phenotypes, focusing on how the human genome varies between individuals, identifying associations with phenotypes/diseases, and the impact of sequencing technologies on reading the genome. The evolution of projects like HapMap and th

0 views • 35 slides


NIFA's Role in Catalyzing Transformative Research on Animal Genome to Phenome

NIFA, a leading federal agency in food and agricultural sciences, provides funding for innovative research on animal genomics and breeding. They support projects that address societal challenges and promote advancements in agriculture. The focus is on translating genome information into actionable i

0 views • 9 slides


Understanding GWAS: A Brief Overview of Genetic Association Studies

GWAS, or Genome-Wide Association Studies, are a method used to map genes associated with traits or diseases by analyzing genetic markers throughout the genome. This process involves statistically testing the association between SNPs and traits using regression or chi-squared tests in a hypothesis-fr

0 views • 19 slides


Efficient Design Strategies for Minimizing Test Application Time in SoC

This paper discusses innovative design approaches to minimize test application time (TAT) in System-on-Chip (SoC) testing. It addresses challenges in incorporating hardware and power constraints into SoC test scheduling, focusing on test access mechanism (TAM) design and test scheduling strategies.

0 views • 23 slides