Bioinformatics analysis - PowerPoint PPT Presentation


Explore Edexcel Computer Science GCSE Course Information

The Edexcel Computer Science GCSE is an ideal pathway for students interested in a computing career, covering fundamental computer science principles, practical problem-solving using a programming language, and understanding digital systems. The course focuses on developing creativity, analytical th

1 views • 4 slides


Understanding Molecular Docking in Bioinformatics

Explore the world of molecular docking in bioinformatics through in silico approaches, learning about protein-ligand interactions, modes of docking, different docking approaches, and the theory of enzymes. Discover how this computational method helps predict the binding affinity and conformation of

4 views • 41 slides



Understanding Longest Common Subsequences in Bioinformatics

DNA Sequence Alignment is a crucial task in bioinformatics, where dynamic programming helps in finding the best alignment between DNA strings efficiently. The Longest Common Subsequence (LCS) problem aims to discover the longest shared subsequence between two strings, offering applications in DNA si

1 views • 21 slides


Bioinformatics

Bioinformatics involves analyzing biological sequences through sequence alignment to uncover functional, structural, and evolutionary insights. This process helps in tasks like annotation of sequences, modeling protein structures, and analyzing gene expression experiments. Basic steps include compar

0 views • 6 slides


Bioinformatics for Genomics Lecture Series 2022 Overview

Delve into the Genetics and Genome Evolution (GGE) Bioinformatics for Genomics Lecture Series 2022 presented by Sven Bergmann. Explore topics like RNA-seq, differential expression analysis, clustering, gene expression data analysis, epigenetic data analysis, integrative analysis, CHIP-seq, HiC data,

0 views • 36 slides


Exploring Bioinformatics: Careers, Research, and Disciplines

Bioinformatics is an interdisciplinary field combining biology, computer science, mathematics, and statistics. Dr. Matthew Cserhati, a bioinformatics programmer, has a background in biology and software engineering. His research includes projects like NeuroAIDS database development and Staphylococcu

2 views • 46 slides


Exploring the World of Bioinformatics Databases

Bioinformatics databases are essential tools in handling molecular biological data, classified into sequence and structure databases. Primary databases store raw data, while secondary databases contain curated information for research. Examples include GenBank, Protein Data Bank, and SWISS-Prot.

1 views • 38 slides


Gene Prediction: Similarity-Based Approaches in Bioinformatics

Gene prediction in bioinformatics involves predicting gene locations in a genome using different approaches like statistical methods and similarity-based approaches. The similarity-based approach uses known genes as a template to predict unknown genes in newly sequenced DNA fragments. This method in

1 views • 40 slides


An Overview of Biological Databases in Bioinformatics

Biological databases play a crucial role in bioinformatics, storing vast amounts of data related to nucleotide sequences, protein sequences, and more. These databases are publicly accessible and essential for research in biological fields. Primary databases, such as GenBank, EMBL, and DDBJ, contain

0 views • 13 slides


Understanding Sequence Alignment in Bioinformatics

Explore the significance of aligning DNA, RNA, and protein sequences for identifying similarities and relationships. Learn about pairwise and multiple alignment methods like Needleman-Wunsch and Smith-Waterman, and how they help in discovering functional, structural, and evolutionary connections bet

0 views • 14 slides


Understanding Sequence Alignment and Tools in Bioinformatics

Explore the concepts of homology, orthologs, and paralogs in bioinformatics, along with different types of sequence alignment such as global, local, and semi-global. Learn about popular alignment tools like Blast and Fasta and how they are used for analyzing sequences. Dive into the world of NCBI an

0 views • 32 slides


Understanding Sequence Alignment Methods in Bioinformatics

Sequence alignment is crucial in bioinformatics for identifying similarities between DNA, RNA, or protein sequences. Methods like Pairwise Alignment and Multiple Sequence Alignment help in recognizing functional, structural, and evolutionary relationships among sequences. The Needleman-Wunsch algori

0 views • 18 slides


Understanding Sequence Alignment in Bioinformatics

Sequence alignment in bioinformatics involves arranging DNA, RNA, or protein sequences to identify similarities for functional, structural, and evolutionary insights. It helps in comparing genes, proteins, and discovering conserved regions, highlighting the importance of global and local alignment m

0 views • 19 slides


Efficient Resource Management for Multi-Agent System Execution on Parallel Architectures with OpenCL

This research focuses on efficiently managing memory and computing resources for executing multi-agent systems on parallel architectures using OpenCL. The study presents a hybrid approach involving population-level molecular virtual chemistry and individual-level virtual cells. The work enhances a p

1 views • 33 slides


Explore Cromwell and WDL Bioinformatics Workflows

Discover the world of Cromwell and WDL bioinformatics workflows at any scale, with emphasis on the scalability and flexibility of the execution engine. Learn about the Workflow Description Language and basic plumbing concepts. Unveil the multiple backends for maximum flexibility in Cromwell's execut

0 views • 14 slides


GPU Accelerated Algorithm for 3D Delaunay Triangulation

Thanh-Tung Cao, Todd Mingcen Gao, Tiow-Seng Tan, and Ashwin Nanjappa from the National University of Singapore's Bioinformatics Institute present a GPU-accelerated algorithm for 3D Delaunay triangulation. Their work explores the background, related works, algorithm implementation, and results of thi

0 views • 24 slides


Strengthening the Bioinformatics Community in the Netherlands

NBIC Galaxy, in collaboration with BioAssist, plays a pivotal role in bolstering the bioinformatics community in the Netherlands. With a focus on training, collaboration, and sharing tools, Galaxy enables scientists to leverage national HPC infrastructures for analysis, further enhancing research ca

0 views • 17 slides


Exploring Bioinformatics: Applications and Significance in Biotechnology

Bioinformatics involves the analysis of molecular biology data using information systems, computer science, and other techniques. It plays a crucial role in various fields like disease prevention, treatment, animal modeling, forensic analysis, and more, aiming to improve the quality of life and enha

0 views • 17 slides


Understanding Data Mining and Analytics in Bioinformatics

Data mining in bioinformatics involves descriptive analysis of statistical attributes, creating predictive models, and empirically verifying them. By employing algorithms from various fields, data mining helps in tasks like classification, clustering, association analysis, and regression. The proces

0 views • 14 slides


The Power of Unix Command Line Basics for Text Processing in Bioinformatics

Unix Shell commands such as sort, cut, uniq, join, paste, sed, grep, awk, wc, diff, comm, and cat are essential for text processing in bioinformatics. These tools allow seamless manipulation of text data without the need for intermediate files, making file processing efficient and powerful. By pipin

0 views • 19 slides


Overview of Perl Programming: Features, Popularity, and Learning

Perl is a versatile scripting language suitable for various tasks such as test processing, system administration, and bioinformatics. Despite a decline in popularity due to the rise of languages like PHP and Python, Perl remains useful and easily accessible on different platforms. Learning Perl requ

0 views • 24 slides


Introduction to Linux and Commands - Overview and Benefits

Linux is a powerful operating system with roots in UNIX, offering a wide array of functionalities for users. The program goals include presenting the Linux OS basics, introducing fundamental command-line operations, and showcasing the utilization of bioinformatics software. The content explores the

0 views • 79 slides


Efficient String Similarity Search: A Cross Pivotal Approach in Computer Science and Engineering

Explore the importance of string similarity search in handling dirty data, with applications in duplicate detection, spelling correction, and bioinformatics. Learn about similarity measurement using edit distance and the challenge of time complexity in validation. Discover the filter-and-verificatio

0 views • 30 slides


The Early Introduction of Dynamic Programming in Computational Biology

The early integration of dynamic programming in computational biology, spearheaded by David Sankoff, revolutionized sequence comparison, multiple alignment, and phylogeny analyses. Sankoff's pioneering work in the 1970s laid the foundation for bioinformatics, recognizing the key role of algorithm de

0 views • 34 slides


Understanding Motifs in Bioinformatics

Bioinformatics studies the patterns of sequences called motifs, which play significant roles in biological functions. Conserving information from DNA or proteins, motifs can be predicted de novo using various tools and strategies. Exploring these motifs aids in understanding regulatory elements and

0 views • 15 slides


Exploring RNA Secondary Structure Prediction in Bioinformatics

RNA secondary structure prediction is a key concept in bioinformatics, encompassing features like stems, loops, and bulges. This presentation delves into the importance of RNA beyond mRNA, highlighting rRNA, tRNA, and regulatory RNA roles. The canonical base pairs A-U and C-G shape the single-strand

0 views • 20 slides


Insights from NBIC Galaxy Hackathon: Building Community and Learning Experiences

NBIC Galaxy Hackathon, a marathon for programmers, brought together bioinformatics experts and programmers to collaborate on innovative projects. The event showcased the community-building efforts, technological advancements, and learning experiences gained through modifying Galaxy, a bioinformatics

0 views • 9 slides


Exploring Whales and DNA through Bioinformatics Adventures

Dive into a fascinating journey through scenarios involving whale bones, wildlife crimes, and DNA mysteries. Uncover the secrets of mitochondrial DNA and bioinformatics in an interactive webquest. Join the experts Jayne Ricciardi, Beth Marass, and special guest Katie Lodes in this educational expedi

0 views • 4 slides


Understanding Parasitology in Veterinary Medicine by Prof. Dr. Suzan A. Al-azizz

Parasitology is a vital study of parasites and their hosts, encompassing various disciplines like cell biology, bioinformatics, genetics, and ecology. This field emphasizes the binomial system of species naming pioneered by Linnaeus. The essence of human scientific naming is exemplified by Homo sapi

0 views • 16 slides


Understanding Cheminformatic Feature Interrelations and Their Conceptual Parallels

Cheminformatic models often rely on individual features like Natural Product Likeness (NPScore) and Structural Features to assess compounds. This study explores how certain features impact scoring and the implications of "good" features in "bad" combinations. It also draws parallels in other fields

0 views • 22 slides


Bioinformatics Core Facility at Aarhus University: Services and Contact Details

The Bioinformatics Core Facility at Aarhus University offers bioinformatics training, consultation, data analysis, research collaboration, and more services for scientists. They provide expertise in NGS analyses, data formatting, knowledge dissemination, and pricing models. Contact them for bioinfor

0 views • 32 slides


Overview of Bioinformatics Topics in Informatics and Biology

Bioinformatics covers various topics such as informatics, biology, programming, statistics, and operating systems. It emphasizes the importance of skills in data management, programming, and statistical analysis for interpreting experimental data types like DNA sequencing and protein structures.

0 views • 55 slides


Efficient Ways to Download Genome Files for Bioinformatics Analysis

Obtain valuable insights into retrieving genome files for bioinformatics analysis utilizing multiple methods such as connecting via Finder, using Filezilla for FTP access, and executing curl commands on Xanadu. Learn how to access coding sequences, feature tables, nucleotide sequences, and encoded p

0 views • 38 slides


Understanding Genomics and Bioinformatics in Genetics Evolution

Delve into the world of genomics and bioinformatics through the Genetics and Genome Evolution (GGE) lecture series by Sven Bergmann. Explore topics such as RNA-seq analysis, differential expression, gene expression measurement techniques, and integrative analysis with epigenetic data. Gain insights

0 views • 37 slides


Understanding NGS Applications in Bioinformatics

Explore the world of Next-Generation Sequencing (NGS) applications in bioinformatics, covering topics such as RNA sequencing, big data challenges, storing genomic datasets, querying genetic information, and data visualization. Dive into the complexities of sequencing technologies, gene expression co

0 views • 41 slides


Mississippi Center for Supercomputing Research (MCSR) Overview

The Mississippi Center for Supercomputing Research (MCSR) supports computational research in various fields like Chemistry, Bioinformatics, Physics, Engineering, and Computer Science for Mississippi IHLs. They provide training to optimize computational resources, offer classes for computational trai

0 views • 23 slides


Creating a Model Organism Database: The Importance and Process

In the realm of bioinformatics, the creation of Model Organism Databases (MODs) plays a crucial role in advancing genomic research and understanding the complexities of various organisms. MODs facilitate pathway analyses, omics data analysis, and the development of metabolic models, serving as valua

0 views • 17 slides


Ethical Challenges in Biomedical Research Consent and Data Control

Advanced bioinformatics research, reliant on large datasets and biobanks, raises concerns about personal data protection and individual consent. Ensuring participant control over data usage, the need for new consent models, and ongoing engagement pose ethical dilemmas in medical research ethics. Ach

0 views • 19 slides


Analysis of Proteasome Gene SNPs as Molecular Markers for Multiple Sclerosis in Latvian Population

This study by I. Trapina aims to investigate the prevalence and functionality of SNPs in proteasome genes to assess their potential as molecular markers for multiple sclerosis in the Latvian population. Multiple sclerosis is an autoimmune disease affecting the central nervous system, and the role of

0 views • 13 slides


Bioinformatics Market

Bioinformatics Market Size, Share, Forecast, & Trends Analysis By Solutions & Services (Knowledge Management, Sequence Analysis, Data Analysis) Application (Genomics, Metabolomics, Transcriptomics) Industry (Health, Agriculture) \u2013 Global Forecas

1 views • 6 slides