Genomic projects - PowerPoint PPT Presentation


2023 Winter Wheat Breeding & Research Updates

Get the latest updates on winter wheat breeding and research from Dr. Sue Mondal, a winter wheat breeder. Explore topics such as abiotic stress tolerance, genomic technologies, rapid cycling, disease resistance, and more.

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Characterising Risk and Biology of Smouldering Myeloma for Early Detection of Symptomatic Myeloma

Understand the risk and biology of smouldering myeloma (SMM) for early detection of symptomatic myeloma. The study will investigate genomic and immune correlates of progression, clonal heterogeneity, and biomarkers using liquid biopsies and T cell phenotype and functionality in SMM.

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Genomic Inference of Human Population Size Changes Over Time

Explore the genomic inference of a severe human bottleneck during the Early to Middle Pleistocene transition, tracing the evolution of hominins over the last 4 million years, and studying essential events in the emergence of humans in the last one million years. Discover well-known human population

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Genetic Testing in Chronic Kidney Disease (CKD): Insights and Applications

Genetic testing plays a crucial role in identifying inherited kidney diseases, with around 15% of CKD cases having monogenic causes. Despite a high percentage of patients reporting a family history of CKD, Mendelian causes only account for about 10% of adult ESRD cases. Understanding the genetic bas

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Latest Developments in Genomic Medicine and NHS Genomic Strategy

The genomic medicine field is advancing rapidly, with a focus on enhancing healthcare services through genomic testing for prediction, prevention, diagnosis, and precision medicine. The NHS is actively integrating genomics into its healthcare system, aiming for equitable access to genomic testing. I

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PROGRAMME 3. PROGRESS ON COMMUNITY AND MAINTENANCE PROJECTS (AS AT 29 FEBRUARY 2024) AS REFLECTED IN THE ANNUAL PERFORMANCE PLAN.

An update on the progress of various infrastructure projects in the Annual Performance Plan is provided, covering categories such as Community-Based Tourism Projects, Maintenance of Provincial Tourism Assets, and Tourism Infrastructure Projects. The report includes details on the implementation stat

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Statistical Genomics and Machine Learning Challenges in AI

Explore the intersection of statistical genomics, machine learning, and artificial intelligence through topics like knowledge mining, MMAP algorithm, cloud computing, and historical events such as Garry Kasparov vs IBM Deep Blue. Delve into the concepts of statistical learning methods, data predicti

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Evolving 5030 District Projects: Encouraging Innovation, Supporting Growth, and Recognizing Success

Evolving 5030 District Projects aims to enhance leverage, visibility, and scale for club projects and beneficiaries. Current initiatives include Harvest Against Hunger, Music4Life, Music Mends Minds, and Partners for Work, among others. The District Policies outline the criteria for establishing and

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Precision Oncology Research using Deep Learning Models

Lujia Chen, a Postdoc Associate at the University of Pittsburgh, focuses on developing deep learning models for precision oncology. By utilizing machine learning, especially deep learning models, Chen aims to identify cancer signaling pathways, predict drug sensitivities, and personalize cancer trea

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Genetic Assessment of CNV.J on Chromosome 3q28 - Case Study J

This case study evaluates a copy number variant (CNV) on chromosome 3q28 (190380498_191783134) associated with a loss of genetic material. The assessment includes genomic content analysis, gene involvement categorization, evaluation of established/predicted genes, and detailed scrutiny of the CCDC50

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Gene Prediction: Similarity-Based Approaches in Bioinformatics

Gene prediction in bioinformatics involves predicting gene locations in a genome using different approaches like statistical methods and similarity-based approaches. The similarity-based approach uses known genes as a template to predict unknown genes in newly sequenced DNA fragments. This method in

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Lab 2: DNA Extraction Techniques for Arthropods and Wolbachia

In this lab activity, students will learn how to isolate genomic DNA from arthropods and Wolbachia bacteria. The goal is to transition from fieldwork to molecular biology, utilizing DNA as a diagnostic tool. The activity involves extracting total genomic DNA from identified species and includes pre-

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Understanding Genetic Markers in Molecular Mapping

Genetic markers play a crucial role in gene mapping within molecular biotechnology. They are fragments of DNA associated with specific genomic locations, aiding in identifying DNA sequences and analyzing genetic variation. Various types of genetic markers such as RFLP, SSR, and SNP offer insights in

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Genomic Evaluation of a 2-Month-Old Female with Tetralogy of Fallot

This case involves a 2-month-old female with Tetralogy of Fallot, carrying a genetic variation in the 19p13.11 region. The evaluation process includes assessing genes, known dosage sensitivity, gene count, and detailed analysis of the duplication found in the DGV Gold Standard Dataset. The frequency

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Understanding Challenges and Gaps in Genetic and Genomic Testing for Breast Cancer Risk

The report highlights current challenges and identified gaps in genetic and genomic testing for breast cancer risk assessment. The workgroup aims to catalog existing materials, address terminology confusion, and improve public and clinician education. Challenges include complex terminology, uncertai

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Understanding Atypical Patterns of Inheritance in Genetics

Explore atypical modes of inheritance such as codominant traits, pseudodominant inheritance, mitochondrial inheritance, anticipation, pleiotropy, variable expressivity, heterogeneity, new mutation, and complex traits in genetics. Learn about codominance, pseudodominance, and atypical presentation of

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Insights into Evolutionary Adaptation and Genetic Variation

The production order highlights the essential role of genomic variation as fuel for natural selection, driving evolutionary adaptation. The Cambrian Explosion timeframe reveals a rapid increase in evolutionary adaptation, showcasing the appearance of diverse animal phyla over a relatively short peri

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Molecularly-Guided Therapy vs Platinum Chemotherapy in CUP Patients

This trial aims to compare the efficacy and safety of molecularly-guided therapy or cancer immunotherapy based on genomic profiling with platinum-based chemotherapy in patients with cancer of unknown primary site. The study design includes multiple treatment regimens guided by genomic profiles, with

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Genetic Evaluation of 6-Month-Old Male with Tetralogy of Fallot

A 6-month-old male with Tetralogy of Fallot was assessed for a paternally inherited CNV at 15q13.2. The evaluation involved analyzing genes, overlap with established regions, haploinsufficiency predictors, gene number, and disease associations. The CNV contained 2 protein-coding genes without known

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Patient Choice for Whole Genome Sequencing in NHS: Education & Training Slide Deck

Developed by Genomics Education Programme, these slides focus on the patient choice consent model for whole genome sequencing in NHS Genomic Medicine Service. The model aims to ensure informed choices for genomic testing, including participation in the National Genomic Research Library. It covers se

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Tourism Infrastructure Projects Briefing to Portfolio Committee

Providing information on discontinued and current tourism infrastructure projects, the presentation outlines the purpose, funding sources, and status of various projects. While some projects have faced challenges leading to discontinuation, a significant number are actively being implemented, primar

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Genetic Findings in a Female Patient with Developmental Disorders

A 3-year-old female patient (Case V) with postnatal growth deficiency, VSD, scoliosis, hand anomalies, hearing loss, and craniofacial dysmorphism was referred for genomic microarray testing. Maternal inheritance of a CNV was identified. Research on PTCHD1 disruptions in males and carrier females hig

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Evolution of Sequence Alignment: From Smith-Waterman to BLAST

Delve into the progression of sequence alignment algorithms, from the foundational Smith-Waterman method with its limitations to the efficient filtering strategy employed by BLAST. Discover the challenges faced and solutions adopted in aligning biological sequences for genomic analysis.

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Comparative Genomics Analysis of Co-Association Networks in Species A and B

Explore Figures 1 through 5 depicting a novel method for identifying co-association networks of orthologs between species A and B. The analysis includes optimizing a cost function through simulated annealing, identifying cross-species modules, and assessing network modularity with respect to GO refe

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Industry Symposium Highlights and Project Specifics for 2022

The Partnering with Industry Symposium in February 2022 presented valuable insights into major capital projects like the Interdisciplinary Science and Innovation Centre (ISIC), Capital Maintenance, Utility Reduction Programs, and Minor Institutional Projects. Specifics of projects such as ISIC's 9,5

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Overview of Off-Grid Hydropower Status in Myanmar

The NEP workshop on Off-Grid Electrification in Myanmar held in Nay Pyi Taw in 2015 shed light on various off-grid hydropower projects in different states of Myanmar. The projects range from small-scale individual setups to larger community-based initiatives, showcasing a mix of private, government-

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Precision Oncology and Genomic Changes in Cancer Treatment

Explore the intricate details of cancer treatment through precision oncology, focusing on cell of origin, genomic changes, tumor microenvironment, host factors, and response to various treatments such as chemotherapy, biological therapy, and immune therapy. The natural history and histology-guided c

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Understanding Multiple Sequence Alignment Methods and Motivation

Multiple Sequence Alignment (MSA) involves aligning three or more biological sequences to reveal evolutionary relationships and subtle similarities. Various methods like Dynamic, Greedy, Progressive, and Iterative approaches are used to overcome challenges in MSA. The motivation behind MSA includes

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Understanding Ridge Regression in Genomic Selection

Explore the concept of ridge regression in genomic selection, involving the development of genomic selection methods, pioneers in implementation, fixed and random effects, and the over-fitting phenomenon. Learn how ridge regression addresses issues of over-fitting by introducing regularization param

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Keyport School District Capital Projects Overview

Keyport School District is planning various capital projects across its schools including facility upgrades, asbestos abatement, plumbing, and field improvements. The total cost for the proposed projects is over $9.8 million. Key projects include boiler replacements, classroom upgrades, gym renovati

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Fusion Science Department Enabling Research Projects 2021-2023

The Fusion Science Department Enabling Research Projects for 2021-2023 focus on developing novel fusion-relevant scientific and technological ideas. These projects, led by Principal Investigators, are distinct from main work packages and involve scientific planning, team collaboration, and resource

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Decoding the Hidden Regulatory Codes Shaping Protein Evolution

The study explores the intricate relationship between genetic and regulatory codes that shape protein evolution. Discusses how duons, genomic footprints, and transcription factors densely populate and constrain protein-coding exons. Highlights how regulatory elements influence codon choice independe

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Insights into Gene Regulation through Genomic Data Analysis

Explore the intricate world of gene regulation and genomic data analysis through a comprehensive study presented at a faculty workshop in 2014. Delve into the evolution and classification of biology, the impact of genome sequencing on digitizing biology, and the potential of genetic information vari

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Progress of Smart Cities Mission in Kota, Rajasthan

The review of the implementation of Smart Cities Mission in Kota, Rajasthan as of 24-03-2017 highlights the appointment of human resources, funds allocation, progress of ongoing projects, tendered projects, preparation of upcoming projects like Lake Development and Solar Master Plan, as well as visi

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Genomics Facilitator's Toolkit Summary & Sample Requirements

This toolkit provides essential resources for healthcare professionals involved in genomics services, covering topics such as genomic medicine, whole genome sequencing, clinical genetic testing methods, interpretation of DNA variants, and more. It also details the specific sample requirements for di

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GPress: A Framework for Querying Genome Annotation Files in Compressed Form

Genome projects generate large GFF files which require significant storage space. GPress offers a solution by compressing GFF files while allowing quick searches and random access. The framework addresses challenges faced by current GFF utilities, providing a more efficient approach to managing and

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Analysis of Technology Projects Backlog Process and Project Trends

This detailed report examines the technology projects backlog process, project trends, and analysis of completed projects within the past year. It delves into metrics such as active projects, completed projects, new projects, and the ratio of incoming requests to completed projects. Additionally, it

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Genomic Selection in Dairy Cattle: Advantages, Disadvantages, and Impact

Genomic selection in dairy cattle focuses on specialized breeds like Holstein, Jersey, Brown Swiss, and Ayrshire. It brings reliable breeding values at a young age, higher success rates in obtaining top bulls, and lower costs for test proofs, leading to a shorter generation interval. While it offers

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Boating Infrastructure Grant Program in California

The Boating Infrastructure Grant (BIG) Program by the California State Parks Division of Boating & Waterways aims to provide funding for boating-related projects. From Tier I projects with grants up to $200,000 to Tier II projects up to $1.5 million, the program supports various activities like tie-

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Genomic Prediction of Feed Intake in U.S. Holsteins

This study discusses the inclusion of feed intake data from U.S. Holsteins in genomic prediction, focusing on residual feed intake (RFI) as a new trait. The research involves data from research herds and genotypes of cows, with genetic evaluation models and genomic evaluation for predicting feed int

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