Overview of HDF Product Designer for Interoperable Data Products

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This content showcases the HDF Product Designer developed by The HDF Group, aimed at facilitating the creation of interoperable and standards-compliant data products in HDF5 format. The toolset's history, key goals, and system architecture are detailed, emphasizing collaborative design, support for multiple platforms, and integration of best practices from data user communities. With a focus on ease of use and content import/export capabilities, the HDF Product Designer streamlines the data product development process.


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  1. HDF Product Designer Aleksandar Jelenak, H. Joe Lee, Ted Habermann Gerd Heber, John Readey, Joel Plutchak The HDF Group The HDF Group HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  2. Data Producers Conundrum Interoperability HDF Features Datatypes Groups Attributes Dimension scales Compression Chunking Scale/offset Etc. Conventions Metadata Software netCDF HDF Product Designer HDF Product Designer Project Requirements Science objectives Data processing, discovery & distribution Data documentation User engagement, preparedness, feedback 2 HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  3. Brief History Original idea from Jeffrey Lee, who developed HDF5 Earth Science Builder/Creator toolset for the ICESat-2 mission A similar tool was independently developed for the SMAP mission The HDF Group was asked to generalize the concept The outcome: HDF Product Designer HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  4. Key Goals Facilitate creation of interoperable and standards-compliant data products in HDF5 as early as possible in the project development process Support multiple computing platforms without requiring the full software stack of development tools and libraries Easy and intuitive editing (create, update, move, copy, delete) of HDF5 objects Collaborative approach to product design (project, team, organization) Incorporation of best practices and standards from targeted data user communities Integration of compliance and interoperability tests into the design workflow Content import from existing files Content export as HDF5 files, HDF5/JSON, or as source code in several programming languages HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  5. System Architecture HDF5 JSON XML HDF4 MAP NcML HDF5 Server RESTful Server Data Store Desktop Client Flexible Output HDF5 JSON HDF5 File Template CSV (Excel) MATLAB IDL Python Fortran 5 HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  6. Software Stack Desktop Client WxPython CLIPS (C Language Integrated Production System) expert system PyCLIPS RESTful Server Python/Tornado h5py Data Store PostgreSQL relational database 6 HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  7. Features Projects Designs CRUD operations on HDF5 objects Conventions support Validation services Collaborative workflow HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  8. Project Organizational and collaborative space One or more users Zero or more designs Every user must belong to at least one project All members of a project has access to its designs User project roles: Manager (not used yet) Designer Value Editor (not used yet) Viewer HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  9. Design Represents content to be stored in one HDF5 file Not actual HDF5 file Versioned Simple timeline of checkpoints (saved versions) Each version must have unique label Only the current working version (label: HEAD) can be edited Import from: NcML (netCDF XML), HDF4 file content map (XML), HDF5/JSON Export as: HDF5 template, HDF5/JSON; source code: Python, MATLAB, IDL, FORTRAN HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  10. CRUD Operations CRUD = create, read, update, delete, copy, move Available on designs and HDF5 objects Support for HDF5 dimension scales continuously improves Properties available to edit: Datatype Rank, shape, max/unlimited dimension sizes Storage (compact, contiguous, chunked) Fill value Compression Attribute value HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  11. Conventions Supported: NetCDF User Guide Attribute Conventions (NUG) Attribute Convention for Data Discovery (ACDD) Climate and Forecast convention (CF) HDF-EOS (partial) Implemented using the CLIPS expert system HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  12. Validation Services A set of online services for interoperability testing The level of support for conventions varies between different software tools so it is important to verify using actual file Input is HDF5 template file Output is typically displayed in a web browser HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  13. Validation Services Currently available: netCDF CDL Get as netCDF3 file CF (NCO s ncdismember) ACDD (THREDDS UDDC service) ISO metadata (THREDDS ISO service) OPeNDAP Data Access Form THREDDS Dataset Access Page HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  14. Collaboration Individuals Teams Projects Programs 14 HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  15. Collaboration Design (Desktop) Share (Server) Publish (Online) 15 HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  16. User Resources User Guide Code is hosted in the NASA Earthdata Code Collaborative Mailing list Regular monthly meetings Us! HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  17. DEMONSTRATION SESIP_0715_AJ DM_PPT_NP_v01

  18. Future Work? Continue improving user interface, source code generators, Adding data to HDF5 templates for further validation tests Generate Word-friendly product description to help with preparing required project documentation Whole file convention compliance checks User feedback always welcome and can influence planning! HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  19. Thank you! Questions? Contact: ajelenak@hdfgroup.org This work was supported under the NASA Earth Observing System Data and Information Systems (EOSDIS) Evolution and Development (EED) Program under prime contract number NNG10HP02C. Any opinions, findings, or conclusions expressed in this material are those of the author and do not necessarily reflect the views of NASA. 19 HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

  20. This work was supported by NASA/GSFC under Raytheon Co. contract number NNG10HP02C 20 HDF Workshop @ 2015 ESIP Summer Meeting SESIP_0715_AJ DM_PPT_NP_v01

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