Aquatic Epidemiology in Fish Populations

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AQUATIC EPIDEMIOLOGY
 
AQUATIC……
EPIDEMIOLOGY
 
When we put those two studies together
what do we get?
 
Study of disease in fish populations and
the factors that determine its occurrence.
Links to many other fields
Clinical medicine
Laboratory medicine
Biostatistics
Health economics
Hatcheries rely on fish health experts in the
Hatcheries rely on fish health experts in the
DNR and at MSU to keep fish populations
DNR and at MSU to keep fish populations
healthy.
healthy.
Diseases might be found in wild populations
Diseases might be found in wild populations
that the DNR wants to spawn. Or found in
that the DNR wants to spawn. Or found in
hatchery raised young, or adult broodstock
hatchery raised young, or adult broodstock
fish.
fish.
Aquatic Epidemiology
 - Branch of laboratory
science that seeks to describe the health, diseases,
and welfare of fish populations.
Asymptomatic
 - Showing no symptoms of the
disease
Biostatistics
 - Branch of statistics that deals with
data related to living organisms.
Broodstock
 - Group of mature fish held in
hatcheries for breeding purposes.
Diagnostic Investigations
 - Procedure to identify
areas of weakness or strength to determine a
condition, disease or illness.
Health Economics
 - Field assessing the economic
impact of fish health and diseases.
Horizontal Gene Transfer
 - The transmission of
disease between organisms.
Isolate
 - a culture of microorganisms isolated for
study
Multilocus Sequencing
 - Technique in molecular
biology for characterizing isolates of microbial
species using DNA sequencing.
Pathogen
 - A bacterium, virus or microorganism that
can cause disease.
Pathology
 - Branch of science studying the structural
and functional manifestations of disease.
Spawning
 - Release or deposit of eggs.
Vertical Transmission
 - The transmission of disease
from parent to offspring.
Weir
 - A low dam temporarily placed across a river
to prevent the upstream migration of fish. Weirs
direct fish into holding ponds for manual spawning.
Wild Stock
 - Fish growing to adulthood in the wild.
SO WHAT ARE FISH HEALTH
EXPERTS LOOKING FOR?
If a wild population has disease,
biologists might choose not to use
them for eggs and milt.
If disease is found in a hatchery they
may have to treat the whole facility,
treat just that species or tank of fish,
or they may need to cull those fish.
The MSU Department of Pathology
The MSU Department of Pathology
and Diagnostic Investigation aids the
and Diagnostic Investigation aids the
DNR in conducting health assessments
DNR in conducting health assessments
of wild and hatchery fish.
of wild and hatchery fish.
Fish testing
Fish testing
Adults (broodstock) from the hatchery
Adults (broodstock) from the hatchery
Adults in the wild
Adults in the wild
Fry in hatcheries
Fry in hatcheries
FLAVO BACTERIA
Bacterial coldwater disease
Caused by bacterium Flavobacterium
psychophilum found in freshwater below
15 degrees Celsius.
Asymptomatic carrier fish and
contaminated water are vectors for the
disease to spread.
FLAVO BACTERIA
Transmission
Horizontal transfer = fish to fish or water
to fish
Vertical transfer = from adult to egg to
fry. (infected eggs)
What does infection look like?
Tissue erosion
Jaw ulcers
Inflammation
Behavior issues
Fins are torn, frayed or missing.
Treatment
Treatment
Cull infected fish
Cull infected fish
Treat the water with UV light and
Treat the water with UV light and
antibiotic
antibiotic
Treat fish
Treat fish
Disinfect eggs
Disinfect eggs
 
Found in 23 states and 1
Found in 23 states and 1
province since 1981.
province since 1981.
470 known 
470 known 
Fp
Fp
 isolates
 isolates
An “isolate” is a strain of a
An “isolate” is a strain of a
species, like a breed of dog.
species, like a breed of dog.
 
The chart plots the known Flavobacteria isolates.
The chart plots the known Flavobacteria isolates.
The black dots’ size indicates occurrence rates (larger
The black dots’ size indicates occurrence rates (larger
is more occurrences).
is more occurrences).
The oval outlines group “families” of related isolates.
The oval outlines group “families” of related isolates.
The numbers indicate the “name” of the isolates.
The numbers indicate the “name” of the isolates.
While there are many that have been typed, not all are
While there are many that have been typed, not all are
present in Michigan waters/fish. The chart begins to color
present in Michigan waters/fish. The chart begins to color
code those that are found here.
code those that are found here.
Red = 1 state
Red = 1 state
Blue = 2-4 states
Blue = 2-4 states
Green = 5-9 states
Green = 5-9 states
Yellows = more than 10 states
Yellows = more than 10 states
Globes = other countries
Globes = other countries
KEY TO ABBREVIATIONS
Isolate infections in the following activities are described with what is called a “lot code”.
Below is a chart that describes what each portion of the code means.
 
Source of Eggs Code
:  LM=Little Manistee Weir
                                          PL=Platte River Weir
 
Hatchery Codes:
          MA = Marquette Hatchery
  
     
   
  TH = Thompson Hatchery
 
  
     
   
  OD = Oden Hatchery
   
   
 
          HA = Harrietta Hatchery
  
      
   
  WL = Wolf Lake Hatchery
Species Code Key
    BNT
 - Brown Trout
    CHS
 - Chinook Salmon
    COS
 - Coho Salmon
    LAT
 - Lake Trout
 
      SE - Seneca
 
      LS - Lake Superior
RBT 
- Rainbow Trout
 
      EL - Eagle Lake Strain
 
      SR - Sturgeon River Strain
 
      GC - Gilcrest Creek Strain
 
      WR - Wild Rose Strain
RBT
 -      MI - Steehead 
Michigan Winter
EXAMPLE 1
 
Only found in Marquette State Fish Hatchery
Only found in production fish (not the broodstock in a different building….)
Never found in wild fish
Only found in Lake Trout. Not even splake in the same facility…. Splake is cross of (M)BKT x (F)LAT
 
How can it affect babies, but not the parents?
How can it get into the hatchery then?
 
Vertical
Transmission?
 
Horizontal
Transmission?
 
Occurrence
in soil/water?
EXAMPLE 2
EXAMPLE 2
 
2017 – broodstock RBT at Oden Hatchery
2018 – production BNT raised at Harietta Hatchery  (but eggs came from Oden)
 
So affects at least two species….
Affected babies and adults….
 
Vertical
Transmission?
 
Horizontal
Transmission?
 
Occurrence
in soil/water?
ACTIVITY 2
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Aquatic epidemiology is a crucial branch of science that focuses on describing the health, diseases, and welfare of fish populations. It involves studying diseases in wild and hatchery-raised fish, identifying factors influencing disease occurrence, and conducting diagnostic investigations to maintain fish health. Fish health experts look for signs of disease in wild populations, hatcheries, and broodstock. Diseases like Flavobacteria, causing bacterial coldwater disease, pose threats to fish health, with symptoms like tissue erosion, jaw ulcers, and fin issues. Effective management strategies involve culling infected fish, water treatment, and disease prevention practices.

  • Aquatic Epidemiology
  • Fish Health
  • Disease Management
  • Flavobacteria
  • Diagnostic Investigations

Uploaded on Sep 17, 2024 | 0 Views


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  1. AQUATIC EPIDEMIOLOGY

  2. AQUATIC EPIDEMIOLOGY When we put those two studies together what do we get? Hatcheries rely on fish health experts in the DNR and at MSU to keep fish populations healthy. Diseases might be found in wild populations that the DNR wants to spawn. Or found in hatchery raised young, or adult broodstock fish. Study of disease in fish populations and the factors that determine its occurrence. Links to many other fields Clinical medicine Laboratory medicine Biostatistics Health economics

  3. Aquatic Epidemiology - Branch of laboratory science that seeks to describe the health, diseases, and welfare of fish populations. Asymptomatic - Showing no symptoms of the disease Biostatistics - Branch of statistics that deals with data related to living organisms. Broodstock - Group of mature fish held in hatcheries for breeding purposes. Diagnostic Investigations - Procedure to identify areas of weakness or strength to determine a condition, disease or illness. Health Economics - Field assessing the economic impact of fish health and diseases. Horizontal Gene Transfer - The transmission of disease between organisms. Isolate - a culture of microorganisms isolated for study Multilocus Sequencing - Technique in molecular biology for characterizing isolates of microbial species using DNA sequencing. Pathogen - A bacterium, virus or microorganism that can cause disease. Pathology - Branch of science studying the structural and functional manifestations of disease. Spawning - Release or deposit of eggs. Vertical Transmission - The transmission of disease from parent to offspring. Weir - A low dam temporarily placed across a river to prevent the upstream migration of fish. Weirs direct fish into holding ponds for manual spawning. Wild Stock - Fish growing to adulthood in the wild.

  4. SO WHAT ARE FISH HEALTH EXPERTS LOOKING FOR? If a wild population has disease, biologists might choose not to use them for eggs and milt. If disease is found in a hatchery they may have to treat the whole facility, treat just that species or tank of fish, or they may need to cull those fish. The MSU Department of Pathology and Diagnostic Investigation aids the DNR in conducting health assessments of wild and hatchery fish. Fish testing Adults (broodstock) from the hatchery Adults in the wild Fry in hatcheries

  5. FLAVO BACTERIA Bacterial coldwater disease Caused by bacterium Flavobacterium psychophilum found in freshwater below 15 degrees Celsius. Asymptomatic carrier fish and contaminated water are vectors for the disease to spread.

  6. FLAVO BACTERIA Transmission Horizontal transfer = fish to fish or water to fish Vertical transfer = from adult to egg to fry. (infected eggs) What does infection look like? Tissue erosion Jaw ulcers Inflammation Behavior issues Fins are torn, frayed or missing. Treatment Cull infected fish Treat the water with UV light and antibiotic Treat fish Disinfect eggs

  7. Found in 23 states and 1 province since 1981. 470 known Fp isolates An isolate is a strain of a species, like a breed of dog.

  8. The chart plots the known Flavobacteria isolates. The black dots size indicates occurrence rates (larger is more occurrences). The oval outlines group families of related isolates. The numbers indicate the name of the isolates. While there are many that have been typed, not all are present in Michigan waters/fish. The chart begins to color code those that are found here. Red = 1 state Blue = 2-4 states Green = 5-9 states Yellows = more than 10 states Globes = other countries

  9. KEY TO ABBREVIATIONS Isolate infections in the following activities are described with what is called a lot code . Below is a chart that describes what each portion of the code means. Isolate Strain Year Diagnosed Production or Broodstock Species Code Species Strain Domestic or Wild Source Year Eggs Taken Source of Eggs Hatchery Where fish are raised Hatchery Where Fish are Transferred ST253 2010- P- RBT- MI- W- 10- LMW- TH- WL ST286 2017- B- RBT- EL- D- 12- OD- Source of Eggs Code: LM=Little Manistee Weir PL=Platte River Weir Hatchery Codes: MA = Marquette Hatchery HA = Harrietta Hatchery Species Code Key BNT - Brown Trout CHS - Chinook Salmon COS - Coho Salmon LAT - Lake Trout SE - Seneca LS - Lake Superior RBT - Rainbow Trout EL - Eagle Lake Strain SR - Sturgeon River Strain GC - Gilcrest Creek Strain WR - Wild Rose Strain RBT - MI - Steehead Michigan Winter TH = Thompson Hatchery OD = Oden Hatchery WL = Wolf Lake Hatchery

  10. EXAMPLE 1 ST353-2019-P-LAT-SE-D-17-MA ST278-2012-P-LAT-LS-D-11-MA Only found in Marquette State Fish Hatchery Only found in production fish (not the broodstock in a different building .) Never found in wild fish Only found in Lake Trout. Not even splake in the same facility . Splake is cross of (M)BKT x (F)LAT How can it affect babies, but not the parents? How can it get into the hatchery then? Horizontal Transmission? Vertical Transmission? Occurrence in soil/water?

  11. EXAMPLE 2 ST286-2017-B-RBT-EL-D-12-OD ST286-2019-P-BNT-WR-D-18-HA 2017 broodstock RBT at Oden Hatchery 2018 production BNT raised at Harietta Hatchery (but eggs came from Oden) So affects at least two species . Affected babies and adults . Horizontal Transmission? Vertical Transmission? Occurrence in soil/water?

  12. ACTIVITY 2 A2a A2b ST253-2010-B-BNT-GC-D-04-OD ST253-2013-B-BNT-SR-D-12-OD A2c A2d ST253-2013-P-BNT-WR-12-OD ST253-2013-B-RBT-EL-D-09-OD A2e ST253-2017-B-RBT-EL-D-12-OD

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