Learn how to download a list of all carbapenem resistance genes and point mutations from the NCBI Reference Gene Catalog for pathogen detection. Follow step-by-step instructions on accessing the catalog, applying filters to select carbapenem subclass, and downloading the data in tab-delimited format

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Explore the concepts of homology, orthologs, and paralogs in bioinformatics, along with different types of sequence alignment such as global, local, and semi-global. Learn about popular alignment tools like Blast and Fasta and how they are used for analyzing sequences. Dive into the world of NCBI an

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Learn how to download a MicroBIGG-E table containing all CARBAPENEM genes found in Pathogen Detection isolate assemblies on NCBI. Follow a step-by-step guide to select, filter, and download subsets of data in batches to get the complete dataset.

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Learn how to correctly cite the Pathogen Detection Resource and data within NCBI Pathogen Detection. Follow guidelines on citing the entire resource, subsets of data, accessing Isolates Browser & MicroBIGG-E, using NCBI AMR resources, and acknowledging data submitters in your manuscript.

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Utilize the Isolates Browser on NCBI Pathogen Detection platform to search for carbapenem-resistant isolates without common acquired resistance genes. Follow steps such as using AST phenotypes and AMR genotypes, cross-browser selection, and filters to isolate relevant results. Detailed instructions

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