How to Download Carbapenem Resistance Genes from NCBI Reference Gene Catalog
Learn how to download a list of all carbapenem resistance genes and point mutations from the NCBI Reference Gene Catalog for pathogen detection. Follow step-by-step instructions on accessing the catalog, applying filters to select carbapenem subclass, and downloading the data in tab-delimited format
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Understanding Sequence Alignment and Tools in Bioinformatics
Explore the concepts of homology, orthologs, and paralogs in bioinformatics, along with different types of sequence alignment such as global, local, and semi-global. Learn about popular alignment tools like Blast and Fasta and how they are used for analyzing sequences. Dive into the world of NCBI an
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How to Download a MicroBIGG-E Table with >100,000 Rows from NCBI Pathogen Detection
Learn how to download a MicroBIGG-E table containing all CARBAPENEM genes found in Pathogen Detection isolate assemblies on NCBI. Follow a step-by-step guide to select, filter, and download subsets of data in batches to get the complete dataset.
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How to Cite NCBI Pathogen Detection Resource
Learn how to correctly cite the Pathogen Detection Resource and data within NCBI Pathogen Detection. Follow guidelines on citing the entire resource, subsets of data, accessing Isolates Browser & MicroBIGG-E, using NCBI AMR resources, and acknowledging data submitters in your manuscript.
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Comprehensive Guide to Identifying Carbapenem-Resistant Isolates Without Common Acquired Carbapenem Resistance Genes
Utilize the Isolates Browser on NCBI Pathogen Detection platform to search for carbapenem-resistant isolates without common acquired resistance genes. Follow steps such as using AST phenotypes and AMR genotypes, cross-browser selection, and filters to isolate relevant results. Detailed instructions
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Promoting Inclusivity and Allyship at UIS: Insights from NCBI Workshop
NCBI International, through its principles and workshops, aims to eliminate prejudice and encourage allyship. The UIS Coalition Builders, campus affiliates of NCBI, work towards fostering a supportive and empowering environment, addressing racial microaggressions, and promoting diversity training. A
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Understanding Genome Browsers and their Significance in Genomic Research
Genome browsers are essential tools for visualizing complex genome information, integrating sequence data with annotations in a user-friendly graphical interface. They enable exploration of chromosomal regions, regulatory elements, and comparative genomics across different organisms. Key examples in
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